RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	ALD5	P40047	520 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	GAT2	P40209	560 aa		1.79	□□□□□ -2.12
DOT6	YER088C	ZIM17	P42844	174 aa		1.79	□□□□□ -2.12
DOT6	YER088C	SFH5	P47008	294 aa		1.79	□□□□□ -2.12
DOT6	YER088C	BRO1	P48582	844 aa		1.79	□□□□□ -2.12
DOT6	YER088C	OAZ1	Q02803	292 aa		1.79	□□□□□ -2.12
DOT6	YER088C	SPH1	Q06160	661 aa		1.79	□□□□□ -2.12
DOT6	YER088C	RRP9	Q06506	573 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	RAX1	Q08760	435 aa		1.79	□□□□□ -2.12
DOT6	YER088C	MED2	Q12124	431 aa		1.79	□□□□□ -2.12
DOT6	YER088C	TPT1	Q12272	230 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	BEM2	P39960	2167 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	TFB1	P32776	642 aa		1.78	□□□□□ -2.12
DOT6	YER088C	YJR085C	P47131	105 aa	Known RBP	1.78	□□□□□ -2.12
DOT6	YER088C	TSA2	Q04120	196 aa		1.78	□□□□□ -2.12
DOT6	YER088C	YDR341C	Q05506	607 aa	Known RBP	1.78	□□□□□ -2.12
DOT6	YER088C	ERP3	Q12403	225 aa		1.78	□□□□□ -2.12
DOT6	YER088C	ACC1	Q00955	2233 aa	Known RBP	1.78	□□□□□ -2.12
DOT6	YER088C	DAL2	P25335	343 aa		1.78	□□□□□ -2.13
DOT6	YER088C	MCR1	P36060	302 aa	Known RBP	1.78	□□□□□ -2.13
DOT6	YER088C	ZTA1	P38230	334 aa	Known RBP	1.78	□□□□□ -2.13
DOT6	YER088C	ADD37	Q03233	198 aa		1.78	□□□□□ -2.13
DOT6	YER088C	AIM32	Q04689	311 aa		1.78	□□□□□ -2.13
DOT6	YER088C	YMR321C	Q04898	105 aa		1.78	□□□□□ -2.13
DOT6	YER088C	YLR456W	Q06199	204 aa		1.78	□□□□□ -2.13
DOT6	YER088C	YRM1	Q12340	786 aa		1.78	□□□□□ -2.13
DOT6	YER088C	GCN1	P33892	2672 aa	Known RBP	1.77	□□□□□ -2.13
DOT6	YER088C	RPS19A	P07280	144 aa	Known RBP	1.77	□□□□□ -2.13
DOT6	YER088C	RPS19B	P07281	144 aa	Predicted RBP	1.77	□□□□□ -2.13
DOT6	YER088C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	1.77	□□□□□ -2.13	not detected
DOT6	YER088C	POP5	P28005	173 aa		1.77	□□□□□ -2.13
DOT6	YER088C	RME1	P32338	300 aa	Known RBP	1.77	□□□□□ -2.13
DOT6	YER088C	CSE2	P33308	149 aa		1.77	□□□□□ -2.13
DOT6	YER088C	PHO88	P38264	188 aa	Predicted RBP	1.77	□□□□□ -2.13
DOT6	YER088C	SBE22	P38814	852 aa		1.77	□□□□□ -2.13
DOT6	YER088C	TVP23	P38962	199 aa		1.77	□□□□□ -2.13
DOT6	YER088C	MMF1	P40185	145 aa	Known RBP	1.77	□□□□□ -2.13
DOT6	YER088C	YML6	P51998	286 aa		1.77	□□□□□ -2.13
DOT6	YER088C	VPS54	Q12071	889 aa		1.77	□□□□□ -2.13
DOT6	YER088C	SOD1	P00445	154 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	SRV2	P17555	526 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	RVS161	P25343	265 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	YCL068C	P25593	260 aa		1.76	□□□□□ -2.13
DOT6	YER088C	RRP1	P35178	278 aa	Predicted RBP	1.76	□□□□□ -2.13
DOT6	YER088C	SLX1	P38324	304 aa		1.76	□□□□□ -2.13
DOT6	YER088C	MDE1	P47095	244 aa		1.76	□□□□□ -2.13
DOT6	YER088C	TOS2	P50078	622 aa		1.76	□□□□□ -2.13
DOT6	YER088C	YGL039W	P53183	348 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	YGR111W	P53265	400 aa		1.76	□□□□□ -2.13
DOT6	YER088C	STD1	Q02794	444 aa		1.76	□□□□□ -2.13
DOT6	YER088C	WTM1	Q12363	437 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	MAS2	P11914	482 aa		1.76	□□□□□ -2.13
DOT6	YER088C	EXG1	P23776	448 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	DBF4	P32325	704 aa		1.76	□□□□□ -2.13
DOT6	YER088C	VMA8	P32610	256 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	CHK1	P38147	527 aa		1.76	□□□□□ -2.13
DOT6	YER088C	GPI16	P38875	610 aa		1.76	□□□□□ -2.13
DOT6	YER088C	CCE1	Q03702	353 aa		1.76	□□□□□ -2.13
DOT6	YER088C	PAL1	Q05518	499 aa	Known RBP	1.76	□□□□□ -2.13
DOT6	YER088C	MDM36	Q06820	579 aa		1.76	□□□□□ -2.13
DOT6	YER088C	BSC6	Q08280	497 aa		1.76	□□□□□ -2.13
DOT6	YER088C	PLP2	Q12017	286 aa		1.76	□□□□□ -2.13
DOT6	YER088C	AEP3	Q12089	606 aa		1.76	□□□□□ -2.13
DOT6	YER088C	RUP1	Q12242	671 aa		1.76	□□□□□ -2.13
DOT6	YER088C	GPM3	Q12326	303 aa		1.76	□□□□□ -2.13
DOT6	YER088C	ISA2	Q12425	185 aa		1.76	□□□□□ -2.13
DOT6	YER088C	LAA1	P39526	2014 aa		1.76	□□□□□ -2.13
DOT6	YER088C	ALG1	P16661	449 aa		1.75	□□□□□ -2.13
DOT6	YER088C	BUD2	P33314	1104 aa		1.75	□□□□□ -2.13
DOT6	YER088C	LTV1	P34078	463 aa		1.75	□□□□□ -2.13
DOT6	YER088C	YHK8	P38776	514 aa		1.75	□□□□□ -2.13
DOT6	YER088C	FAD1	P38913	306 aa		1.75	□□□□□ -2.13
DOT6	YER088C	TOS3	P43637	560 aa		1.75	□□□□□ -2.13
DOT6	YER088C	BNS1	P50084	137 aa		1.75	□□□□□ -2.13
DOT6	YER088C	NUP116	Q02630	1113 aa		1.75	□□□□□ -2.13
DOT6	YER088C	MMT1	Q03218	510 aa		1.75	□□□□□ -2.13
DOT6	YER088C	NDL1	Q06568	189 aa		1.75	□□□□□ -2.13
DOT6	YER088C	RNH203	Q12338	110 aa		1.75	□□□□□ -2.13
DOT6	YER088C	SMC6	Q12749	1114 aa		1.75	□□□□□ -2.13
DOT6	YER088C	HOM3	P10869	527 aa		1.74	□□□□□ -2.13
DOT6	YER088C	CAP2	P13517	287 aa		1.74	□□□□□ -2.13
DOT6	YER088C	RIM1	P32445	135 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	DPH5	P32469	300 aa	Predicted RBP	1.74	□□□□□ -2.13
DOT6	YER088C	CYS4	P32582	507 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	TOA2	P32774	122 aa		1.74	□□□□□ -2.13
DOT6	YER088C	LRP1	P38801	184 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	PTI1	P39927	425 aa	Predicted RBP	1.74	□□□□□ -2.13
DOT6	YER088C	HMF1	P40037	129 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	MOB1	P40484	314 aa		1.74	□□□□□ -2.13
DOT6	YER088C	GAB1	P41733	394 aa		1.74	□□□□□ -2.13
DOT6	YER088C	PMT5	P52867	743 aa		1.74	□□□□□ -2.13
DOT6	YER088C	CSI1	Q04368	295 aa		1.74	□□□□□ -2.13
DOT6	YER088C	YMR027W	Q04371	470 aa		1.74	□□□□□ -2.13
DOT6	YER088C	NOP6	Q07623	225 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	IRC25	Q07951	179 aa		1.74	□□□□□ -2.13
DOT6	YER088C	CUE5	Q08412	411 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	IRA2	P19158	3079 aa		1.74	□□□□□ -2.13
DOT6	YER088C	SSC1	P0CS90	654 aa	Known RBP	1.74	□□□□□ -2.13
DOT6	YER088C	YBR056W	P38081	501 aa		1.74	□□□□□ -2.13
DOT6	YER088C	OLA1	P38219	394 aa	Known RBP	1.74	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms