RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIZ1	YDR409W	ATG22	P25568	528 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	MGR1	P25573	417 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	MEI5	P32489	222 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	ZRT3	P34240	503 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	MCR1	P36060	302 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	MRPL16	P38064	232 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	LSM12	P38828	187 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	EXO1	P39875	702 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	HMF1	P40037	129 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	PCL6	P40038	420 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	ERG10	P41338	398 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	SER2	P42941	309 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	BUD13	P46947	266 aa	Predicted RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	BIT61	P47041	543 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	IRC18	P47056	224 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	RIB4	P50861	169 aa	Predicted RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	GTR2	P53290	341 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	DBP6	P53734	629 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	ZRG17	P53735	605 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	ALG11	P53954	548 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	RMI1	Q02685	241 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	GRX5	Q02784	150 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	INA17	Q02888	182 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	BCH1	Q05029	724 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	ARO10	Q06408	635 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	SYT1	Q06836	1226 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	JLP1	Q12358	412 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	WTM1	Q12363	437 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	RRP12	Q12754	1228 aa	Known RBP	3.15	□□□□□ -1.9
SIZ1	YDR409W	YJR112W-A	Q3E743	109 aa		3.15	□□□□□ -1.9
SIZ1	YDR409W	PRC1	P00729	532 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	ATP1	P07251	545 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	PET494	P07390	489 aa	Predicted RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	RPS4A	P0CX35	261 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	RPS4B	P0CX36	261 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	SAM1	P10659	382 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	SCH9	P11792	824 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	ART10	P18634	518 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	SAR1	P20606	190 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	RHB1	P25378	209 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	URK1	P27515	501 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	CAF4	P36130	643 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	TVP38	P36164	337 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	MRPL17	P36528	281 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	AHP1	P38013	176 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	MAK5	P38112	773 aa	Predicted RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	ARA1	P38115	344 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	YBR137W	P38276	179 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	ERV46	P39727	415 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	CTK2	P46962	323 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	APS3	P47064	194 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	TAF4	P50105	388 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	YGR127W	P53275	312 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	GND2	P53319	492 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	DUS1	P53759	423 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	RSM28	Q03430	361 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	YML037C	Q03703	340 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	HPT1	Q04178	221 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	ARG7	Q04728	441 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	SHS1	Q07657	551 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	YNG1	Q08465	219 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	RMD5	Q12508	421 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	LSO2	Q3E772	92 aa	Known RBP	3.15	□□□□□ -1.91
SIZ1	YDR409W	YHR213W-A	Q8TGT4	77 aa		3.15	□□□□□ -1.91
SIZ1	YDR409W	DIF1	O13577	133 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	HPR1	P17629	752 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	ASC1	P38011	319 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	ECM31	P38122	312 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	LEU5	P38702	357 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	MIT1	P40002	666 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	PHM8	P40025	321 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	GET2	P40056	285 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	PTR3	P43606	678 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	MTR3	P48240	250 aa	Predicted RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	NCS6	P53088	359 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	SCW11	P53189	542 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	YNL181W	P53878	407 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	YNL134C	P53912	376 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	DID2	P69771	204 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	EMI2	Q04409	500 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	HUA2	Q12134	243 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	RLM1	Q12224	676 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	RPN6	Q12377	434 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	SKM1	Q12469	655 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	ECM29	P38737	1868 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	IPP1	P00817	287 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
SIZ1	YDR409W	ERG20	P08524	352 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	RPL4A	P10664	362 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	FRS1	P15624	595 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	HXT2	P23585	541 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	NFS1	P25374	497 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	ADE1	P27616	306 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	ERG1	P32476	496 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	HIS7	P33734	552 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	SEC24	P40482	926 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	YAR1	P46683	200 aa		3.14	□□□□□ -1.91
SIZ1	YDR409W	RPL4B	P49626	362 aa	Known RBP	3.14	□□□□□ -1.91
SIZ1	YDR409W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
SIZ1	YDR409W	NUP49	Q02199	472 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms