RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C YIL108WP40483 696 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C YIL024CP40543 189 aa4.26□□□□□ -1.73
PRP28YDR243C THI12P42883 340 aa4.26□□□□□ -1.73
PRP28YDR243C THI5P43534 340 aa4.26□□□□□ -1.73
PRP28YDR243C MOG1P47123 218 aa4.26□□□□□ -1.73
PRP28YDR243C JAC1P53193 184 aa4.26□□□□□ -1.73
PRP28YDR243C BUD32P53323 261 aa4.26□□□□□ -1.73
PRP28YDR243C MRPS16Q02608 121 aa4.26□□□□□ -1.73
PRP28YDR243C SPR28Q04921 423 aa4.26□□□□□ -1.73
PRP28YDR243C CDC123Q05791 360 aa4.26□□□□□ -1.73
PRP28YDR243C YHC1Q05900 231 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C THI13Q07748 340 aa4.26□□□□□ -1.73
PRP28YDR243C PML1Q07930 204 aaPredicted RBP4.26□□□□□ -1.73
PRP28YDR243C FMP25Q08023 583 aa4.26□□□□□ -1.73
PRP28YDR243C YOR365CQ08844 703 aa4.26□□□□□ -1.73
PRP28YDR243C ENV7Q12003 364 aa4.26□□□□□ -1.73
PRP28YDR243C PKH2Q12236 1081 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C PSF1Q12488 208 aa4.26□□□□□ -1.73
PRP28YDR243C PCC1Q3E833 88 aa4.26□□□□□ -1.73
PRP28YDR243C RIB3Q99258 208 aa4.26□□□□□ -1.73
PRP28YDR243C FRT1Q99332 602 aa4.26□□□□□ -1.73
PRP28YDR243C ADH2P00331 348 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C HAP2P06774 265 aa4.25□□□□□ -1.73
PRP28YDR243C RPL31AP0C2H8 113 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C RPL31BP0C2H9 113 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C GUK1P15454 187 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C SEC59P20048 519 aa4.25□□□□□ -1.73
PRP28YDR243C AIM17P23180 465 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C RPL24BP24000 155 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C SRB2P34162 210 aa4.25□□□□□ -1.73
PRP28YDR243C PIN4P34217 668 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PRP28YDR243C LOT5P34234 306 aa4.25□□□□□ -1.73
PRP28YDR243C MRPL4P36517 319 aa4.25□□□□□ -1.73
PRP28YDR243C CTP1P38152 299 aa4.25□□□□□ -1.73
PRP28YDR243C AIM3P38266 947 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C BIT2P38346 545 aa4.25□□□□□ -1.73
PRP28YDR243C END3P39013 349 aa4.25□□□□□ -1.73
PRP28YDR243C FMP52P40008 231 aa4.25□□□□□ -1.73
PRP28YDR243C GIP2P40036 548 aa4.25□□□□□ -1.73
PRP28YDR243C PGD1P40356 397 aa4.25□□□□□ -1.73
PRP28YDR243C MET28P40573 187 aa4.25□□□□□ -1.73
PRP28YDR243C CHS6P40955 746 aa4.25□□□□□ -1.73
PRP28YDR243C ASG7P46993 209 aa4.25□□□□□ -1.73
PRP28YDR243C PRY1P47032 299 aa4.25□□□□□ -1.73
PRP28YDR243C YJL045WP47052 634 aa4.25□□□□□ -1.73
PRP28YDR243C PUS4P48567 403 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C BUD9P53226 547 aa4.25□□□□□ -1.73
PRP28YDR243C EOS1P53938 366 aa4.25□□□□□ -1.73
PRP28YDR243C SLM2P53955 656 aa4.25□□□□□ -1.73
PRP28YDR243C KTR5P53966 522 aaPredicted RBP4.25□□□□□ -1.73
PRP28YDR243C TOF2Q02208 771 aa4.25□□□□□ -1.73
PRP28YDR243C YPL014WQ02606 381 aa4.25□□□□□ -1.73
PRP28YDR243C CTL1Q03220 320 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C NEJ1Q06148 342 aa4.25□□□□□ -1.73
PRP28YDR243C NUT2Q06213 157 aa4.25□□□□□ -1.73
PRP28YDR243C FRQ1Q06389 190 aa4.25□□□□□ -1.73
PRP28YDR243C MCA1Q08601 432 aa4.25□□□□□ -1.73
PRP28YDR243C YGL194C-AQ2V2P6 80 aa4.25□□□□□ -1.73
PRP28YDR243C FSH3Q99369 266 aa4.25□□□□□ -1.73
PRP28YDR243C BUD3P25558 1636 aa4.25□□□□□ -1.73
PRP28YDR243C SAT4P25333 603 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C BUB3P26449 341 aa4.25□□□□□ -1.73
PRP28YDR243C RNP1P32385 249 aa4.25□□□□□ -1.73
PRP28YDR243C NRP1P32770 719 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PRP28YDR243C TGL1P34163 548 aa4.25□□□□□ -1.73
PRP28YDR243C SKT5P34226 696 aa4.25□□□□□ -1.73
PRP28YDR243C ZRT3P34240 503 aa4.25□□□□□ -1.73
PRP28YDR243C TVP38P36164 337 aa4.25□□□□□ -1.73
PRP28YDR243C APT2P36973 181 aa4.25□□□□□ -1.73
PRP28YDR243C SHE3P38272 425 aaKnown RBP4.25□□□□□ -1.73
PRP28YDR243C ARN2P38724 620 aa4.25□□□□□ -1.73
PRP28YDR243C GEP4P38812 185 aa4.25□□□□□ -1.73
PRP28YDR243C CYC2P38909 366 aa4.25□□□□□ -1.73
PRP28YDR243C HIS6P40545 261 aa4.25□□□□□ -1.73
PRP28YDR243C OPT1P40897 799 aa4.25□□□□□ -1.73
PRP28YDR243C TIM13P53299 105 aa4.25□□□□□ -1.73
PRP28YDR243C GND2P53319 492 aa4.25□□□□□ -1.73
PRP28YDR243C YAT1P80235 687 aa4.25□□□□□ -1.73
PRP28YDR243C ADI1Q03677 179 aa4.25□□□□□ -1.73
PRP28YDR243C HOF1Q05080 669 aa4.25□□□□□ -1.73
PRP28YDR243C EST2Q06163 884 aa4.25□□□□□ -1.73
PRP28YDR243C RAD34Q06665 692 aa4.25□□□□□ -1.73
PRP28YDR243C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PRP28YDR243C YLR046CQ12253 270 aa4.25□□□□□ -1.73
PRP28YDR243C YLR108CQ12259 485 aa4.25□□□□□ -1.73
PRP28YDR243C RPS9AO13516 197 aaKnown RBP4.24□□□□□ -1.73
PRP28YDR243C AAC1P04710 309 aa4.24□□□□□ -1.73
PRP28YDR243C RPL9AP05738 191 aaKnown RBP4.24□□□□□ -1.73
PRP28YDR243C RPS9BP05755 195 aaKnown RBP4.24□□□□□ -1.73
PRP28YDR243C FUN14P18411 198 aa4.24□□□□□ -1.73
PRP28YDR243C MIH1P23748 554 aa4.24□□□□□ -1.73
PRP28YDR243C PER1P25625 357 aa4.24□□□□□ -1.73
PRP28YDR243C COQ3P27680 312 aa4.24□□□□□ -1.73
PRP28YDR243C DBF4P32325 704 aa4.24□□□□□ -1.73
PRP28YDR243C ERG1P32476 496 aaKnown RBP4.24□□□□□ -1.73
PRP28YDR243C YKL162CP36052 402 aa4.24□□□□□ -1.73
PRP28YDR243C YCR087C-AP37263 153 aa4.24□□□□□ -1.73
PRP28YDR243C TAT1P38085 619 aa4.24□□□□□ -1.73
PRP28YDR243C ICS2P38284 255 aa4.24□□□□□ -1.73
PRP28YDR243C PRS3P38689 320 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms