RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	STE24	P47154	453 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	PAC10	P48363	199 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	SYF2	P53277	215 aa	Predicted RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	TPS1	Q00764	495 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	RSC9	Q03124	581 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	TRM82	Q03774	444 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	MGR3	Q04472	501 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	RRP40	Q08285	240 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	YPL066W	Q12194	479 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	MEX67	Q99257	599 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	RPS17A	P02407	136 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	RPS17B	P14127	136 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	SNF5	P18480	905 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	ARO7	P32178	256 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	PET309	P32522	965 aa	Predicted RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	SCO2	P38072	301 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	TRM7	P38238	310 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	ARN2	P38724	620 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	PTC7	P38797	343 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	AXL2	P38928	823 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	TAT2	P38967	592 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	LYS12	P40495	371 aa	Known RBP	4.42	□□□□□ -1.7
SUP35	YDR172W	MAD2	P40958	196 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	STB1	P42845	420 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	YGR201C	P42936	225 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	YFL054C	P43549	646 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	ALR2	P43553	858 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	HNT2	P49775	206 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	SDT1	P53078	280 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	TWF1	P53250	332 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	NUP49	Q02199	472 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	MAK3	Q03503	176 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	KRE28	Q04431	385 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	GAL83	Q04739	417 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	ROY1	Q04847	553 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	YPR022C	Q12139	1133 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	YOR114W	Q12219	294 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	MRX4	Q12467	430 aa		4.42	□□□□□ -1.7
SUP35	YDR172W	GLT1	Q12680	2145 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	YCK1	P23291	538 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	TCD2	P36101	447 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	YRO2	P38079	344 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	BAP2	P38084	609 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	MCM7	P38132	845 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	BNA4	P38169	460 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	YLF2	P38746	405 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	FMO1	P38866	432 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	BAT1	P38891	393 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	RAD17	P48581	401 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	RAI1	P53063	387 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	CDH1	P53197	566 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	ART5	P53244	586 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	CWC24	P53769	259 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	YTM1	Q12024	460 aa	Predicted RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	RBD2	Q12270	262 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	SKS1	Q12505	502 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	SLH1	P53327	1967 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	MDM35	O60200	86 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	REP1	P03871	373 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	MET2	P08465	486 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	RED1	P14291	827 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	CMP2	P14747	604 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	SCL1	P21243	252 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	RPL24B	P24000	155 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	NTH1	P32356	751 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	DOM34	P33309	386 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	NUF2	P33895	451 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	LOT5	P34234	306 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	SBE22	P38814	852 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	CTF8	P38877	133 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	GDI1	P39958	451 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	ISC1	P40015	477 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	RRG9	P40156	214 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	JLP2	P40206	208 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	TIF34	P40217	347 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	MNT3	P40549	630 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	PAC11	P40960	533 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	PSA1	P41940	361 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	QRI7	P43122	407 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	IRC6	P43615	237 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	RET2	P43621	546 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	JHD2	P47156	728 aa	Predicted RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	HXT16	P47185	567 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	ROG1	P53118	685 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	TNA1	P53322	534 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	MTQ1	P53944	314 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	RIM13	Q03792	727 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	RNH202	Q05635	350 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	THP3	Q12049	470 aa	Known RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	MED2	Q12124	431 aa		4.41	□□□□□ -1.7
SUP35	YDR172W	DCP1	Q12517	231 aa	Predicted RBP	4.41	□□□□□ -1.7
SUP35	YDR172W	ZWF1	P11412	505 aa	Known RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	HOM2	P13663	365 aa	Known RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	ERG1	P32476	496 aa	Known RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
SUP35	YDR172W	SRX1	P36077	127 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	PIM1	P36775	1133 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	BIG1	P38813	335 aa		4.4	□□□□□ -1.71
SUP35	YDR172W	YIL108W	P40483	696 aa	Known RBP	4.4	□□□□□ -1.71
SUP35	YDR172W	ZIM17	P42844	174 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms