RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 GOLGA8FQ08AF8 430 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 GOLGA8DPQ0D2H9 430 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 TTC22Q5TAA0 569 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 MIGA1Q8NAN2 632 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 MAIP1Q8WWC4 291 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGAP45Q92619 1136 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 VPS50Q96JG6 964 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 C1orf74Q96LT6 269 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 CCDC77Q9BR77 488 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 TTPALQ9BTX7 342 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 PLVAPQ9BX97 442 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 CBX8Q9HC52 389 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 DDX28Q9NUL7 540 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 TYW1Q9NV66 732 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 IL1RAPL1Q9NZN1 696 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 ANGPTL2Q9UKU9 493 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 TNNQ9UQP3 1299 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 SNX8Q9Y5X2 465 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 ABCC5O15440 1437 aa4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 AHDC1Q5TGY3 1603 aaPredicted RBP4.2□□□□□ -1.74
R3HDM1-220ENST00000628915 A6NNZ2 444 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 KCNJ13O60928 360 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 BAIAP3O94812 1187 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 KRT75O95678 551 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CAPN1P07384 714 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 HSMCR30P0CW71 290 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 GDI1P31150 447 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 NUP62P37198 522 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ZNF165P49910 485 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ETF1P62495 437 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 GSTO1P78417 241 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 APOBRQ0VD83 1088 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TUBB8Q3ZCM7 444 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SPDYCQ5MJ68 293 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CREB3L3Q68CJ9 461 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SRGAP1Q7Z6B7 1085 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 KIRREL3Q8IZU9 778 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ESX1Q8N693 406 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 AGR3Q8TD06 166 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 INPP5DQ92835 1189 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 RNF34Q969K3 372 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 THAP11Q96EK4 314 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 WDR6Q9NNW5 1121 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TBC1D22BQ9NU19 505 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ANO10Q9NW15 660 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 EURLQ9NYK6 297 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PTBP2Q9UKA9 531 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TRAF3IP3Q9Y228 551 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CBY1Q9Y3M2 126 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 MTF2Q9Y483 593 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SYCP2Q9BX26 1530 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 BECN2A8MW95 431 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 STX6O43752 255 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CBFA2T3O75081 653 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 RNF40O75150 1001 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ARHGAP25P42331 645 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PEX5P50542 639 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PCSK7Q16549 785 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ANO6Q4KMQ2 910 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 JAMLQ86YT9 394 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TCP11L2Q8N4U5 519 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 BCL7CQ8WUZ0 217 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 HNRNPLLQ8WVV9 542 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 NUDT16Q96DE0 195 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 NELL2Q99435 816 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 MPHOSPH8Q99549 860 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 HERPUD2Q9BSE4 406 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TSEN34Q9BSV6 310 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SRCIN1Q9C0H9 1055 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ZMYND8Q9ULU4 1186 aaPredicted RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PRUNE2Q8WUY3 3088 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ABCC11Q96J66 1382 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 LRRC7Q96NW7 1537 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SYCE1LA8MT33 242 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ZBBXA8MT70 800 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 LILRB3O75022 631 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 IDH1O75874 414 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SSBP05455 408 aaKnown RBP eCLIP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 S100A9P06702 114 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 STMN1P16949 149 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PRKAR1BP31321 381 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 TRIM23P36406 574 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SCNN1DP51172 638 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 OXCT1P55809 520 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 GABREP78334 506 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CDK17Q00537 523 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 PABPC4Q13310 644 aaKnown RBP eCLIP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 DHX34Q14147 1143 aaKnown RBP4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 LONRF2Q1L5Z9 754 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 ODF2Q5BJF6 829 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CYP26C1Q6V0L0 522 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 CCDC129Q6ZRS4 1044 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 MAP7D3Q8IWC1 876 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 SPARTQ8N0X7 666 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 FBXO22Q8NEZ5 403 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 OR8H1Q8NGG4 311 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 UCMAQ8WVF2 138 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 RELTQ969Z4 430 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 FUT8Q9BYC5 575 aa4.19□□□□□ -1.74
R3HDM1-220ENST00000628915 XAB2Q9HCS7 855 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms