RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 INF2Q27J81 1249 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 ODR4Q5SWX8 454 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 PPP4R3AQ6IN85 833 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 ZNF710Q8N1W2 664 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 ATXN2LQ8WWM7 1075 aaKnown RBP20.55■□□□□ 0.88
VCX3A-203ENST00000612369 SYMPKQ92797 1274 aaKnown RBP20.55■□□□□ 0.88
VCX3A-203ENST00000612369 UNC45AQ9H3U1 944 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 SUGCTQ9HAC7 445 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 THEGQ9P2T0 379 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 DDX25Q9UHL0 483 aaKnown RBP20.55■□□□□ 0.88
VCX3A-203ENST00000612369 PADI3Q9ULW8 664 aa20.55■□□□□ 0.88
VCX3A-203ENST00000612369 LPXNO60711 386 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 C22orf31O95567 290 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 OATP04181 439 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 GCFC2P16383 781 aaKnown RBP20.54■□□□□ 0.88
VCX3A-203ENST00000612369 PAK2Q13177 524 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 B3GNT9Q6UX72 402 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 NEK8Q86SG6 692 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 NECAB1Q8N987 351 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 ETNPPLQ8TBG4 499 aa20.54■□□□□ 0.88
VCX3A-203ENST00000612369 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
VCX3A-203ENST00000612369 WDR81Q562E7 1941 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 PRRC2BQ5JSZ5 2229 aaKnown RBP20.53■□□□□ 0.88
VCX3A-203ENST00000612369 CUL9Q8IWT3 2517 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 RBAK-RBAKDNI3L0D1 243 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 CHMP2AO43633 222 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 FDPSP14324 419 aaKnown RBP20.53■□□□□ 0.88
VCX3A-203ENST00000612369 LETM2Q2VYF4 491 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 TJAP1Q5JTD0 557 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 MIER3Q7Z3K6 550 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 MICALL1Q8N3F8 863 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 FAM20AQ96MK3 541 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 MTUS1Q9ULD2 1270 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 EVPLQ92817 2033 aa20.53■□□□□ 0.88
VCX3A-203ENST00000612369 ZNF862O60290 1169 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 LARGE1O95461 756 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 TMOD1P28289 359 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 TRMT1LQ7Z2T5 733 aaKnown RBP20.52■□□□□ 0.88
VCX3A-203ENST00000612369 METTL13Q8N6R0 699 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 NSUN7Q8NE18 718 aaKnown RBP20.52■□□□□ 0.88
VCX3A-203ENST00000612369 FBXO22Q8NEZ5 403 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 C17orf80Q9BSJ5 609 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 PRDM6Q9NQX0 595 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 TTC3P53804 2025 aa20.52■□□□□ 0.88
VCX3A-203ENST00000612369 TBX3O15119 743 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 RPS6KA5O75582 802 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 KRT2P35908 639 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 CRYBB1P53674 252 aaPredicted RBP20.51■□□□□ 0.87
VCX3A-203ENST00000612369 PRKCEQ02156 737 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 PIK3AP1Q6ZUJ8 805 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 FIBCD1Q8N539 461 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 OXER1Q8TDS5 423 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 GDPD5Q8WTR4 605 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 GJA10Q969M2 543 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 KCNMB3Q9NPA1 279 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 GJB4Q9NTQ9 266 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
VCX3A-203ENST00000612369 RWDD3Q9Y3V2 267 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 LOXHD1Q8IVV2 1947 aa20.51■□□□□ 0.87
VCX3A-203ENST00000612369 GPR182O15218 404 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 STAG3L1P0CL83 205 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 MRPS5P82675 430 aaKnown RBP20.5■□□□□ 0.87
VCX3A-203ENST00000612369 EPC2Q52LR7 807 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 XKR3Q5GH77 459 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 EFCAB12Q6NXP0 572 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 RTN4RL1Q86UN2 441 aaPredicted RBP20.5■□□□□ 0.87
VCX3A-203ENST00000612369 LINC01465Q8N7H1 131 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 LINC01599Q8WXQ3 324 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 ZNF689Q96CS4 500 aaPredicted RBP20.5■□□□□ 0.87
VCX3A-203ENST00000612369 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 RC3H2Q9HBD1 1191 aaKnown RBP20.5■□□□□ 0.87
VCX3A-203ENST00000612369 COG5Q9UP83 839 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 GINS2Q9Y248 185 aa20.5■□□□□ 0.87
VCX3A-203ENST00000612369 COL4A4P53420 1690 aaPredicted RBP20.5■□□□□ 0.87
VCX3A-203ENST00000612369 SLC37A4O43826 429 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 CCNT1O60563 726 aaKnown RBP20.49■□□□□ 0.87
VCX3A-203ENST00000612369 DKC1O60832 514 aaKnown RBP eCLIP20.49■□□□□ 0.87
VCX3A-203ENST00000612369 DGKIO75912 1065 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 NFX1Q12986 1120 aaKnown RBP20.49■□□□□ 0.87
VCX3A-203ENST00000612369 PPP2R5CQ13362 524 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 TRIM29Q14134 588 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
VCX3A-203ENST00000612369 UGCGQ16739 394 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 KRT40Q6A162 431 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 NPAS4Q8IUM7 802 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 CRIPAKQ8N1N5 446 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 ASB2Q96Q27 587 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 NIFKQ9BYG3 293 aaKnown RBP20.49■□□□□ 0.87
VCX3A-203ENST00000612369 CDHR5Q9HBB8 845 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 ERVK-5Q9HDB9 667 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 NOC2LQ9Y3T9 749 aaKnown RBP20.49■□□□□ 0.87
VCX3A-203ENST00000612369 ADGRA3Q8IWK6 1321 aa20.49■□□□□ 0.87
VCX3A-203ENST00000612369 VCANP13611 3396 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 H3BNC9 293 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 GPR32O75388 356 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 MMP1P03956 469 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms