RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 FAM173BQ6P4H8 233 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 PSRC1Q6PGN9 363 aaPredicted RBP22.51■■□□□ 1.19
SSBP4-210ENST00000601444 TPH2Q8IWU9 490 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 ZNF579Q8NAF0 562 aaKnown RBP22.51■■□□□ 1.19
SSBP4-210ENST00000601444 CEP89Q96ST8 783 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 CXXC1Q9P0U4 656 aaPredicted RBP22.51■■□□□ 1.19
SSBP4-210ENST00000601444 LAMA3Q16787 3333 aa22.51■■□□□ 1.19
SSBP4-210ENST00000601444 A0A087WWV3 80 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 CAND2O75155 1236 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 CXCL10P02778 98 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 MGAT3Q09327 533 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 BRAPQ7Z569 592 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 KIAA0319LQ8IZA0 1049 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 METTL13Q8N6R0 699 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 CEP131Q9UPN4 1083 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 MYH9P35579 1960 aaKnown RBP22.5■■□□□ 1.19
SSBP4-210ENST00000601444 LAMA2P24043 3122 aaKnown RBP22.5■■□□□ 1.19
SSBP4-210ENST00000601444 KAT6AQ92794 2004 aa22.5■■□□□ 1.19
SSBP4-210ENST00000601444 CLCN3P51790 818 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 NPEPPSP55786 919 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 RASIP1Q5U651 963 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 RSPH3Q86UC2 560 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 C4orf19Q8IY42 314 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 LRRC71Q8N4P6 559 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 HERVK_113Q902F9 699 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 ZSWIM4Q9H7M6 989 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 CDY2AQ9Y6F7 541 aa22.49■■□□□ 1.19
SSBP4-210ENST00000601444 MED24O75448 989 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 PARNO95453 639 aaKnown RBP22.48■■□□□ 1.19
SSBP4-210ENST00000601444 PFKMP08237 780 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 SPATA31C1P0DKV0 1188 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 YWHABP31946 246 aaKnown RBP22.48■■□□□ 1.19
SSBP4-210ENST00000601444 FXR2P51116 673 aaKnown RBP eCLIP22.48■■□□□ 1.19
SSBP4-210ENST00000601444 MRPS6P82932 125 aaKnown RBP22.48■■□□□ 1.19
SSBP4-210ENST00000601444 ATP2C1P98194 919 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-210ENST00000601444 LRIT3Q3SXY7 679 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 FAM109BQ6ICB4 259 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-210ENST00000601444 EFCAB12Q6NXP0 572 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 PPP1R16BQ96T49 567 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 CDHR5Q9HBB8 845 aa22.48■■□□□ 1.19
SSBP4-210ENST00000601444 DKC1O60832 514 aaKnown RBP eCLIP22.47■■□□□ 1.19
SSBP4-210ENST00000601444 VTNP04004 478 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 FXR1P51114 621 aaKnown RBP eCLIP22.47■■□□□ 1.19
SSBP4-210ENST00000601444 TBC1D8BQ0IIM8 1120 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 DRP2Q13474 957 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 CATSPER3Q86XQ3 398 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 LINC01465Q8N7H1 131 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 DBF4BQ8NFT6 615 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 LRCH3Q96II8 777 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 SUGCTQ9HAC7 445 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 CYP26B1Q9NR63 512 aa22.47■■□□□ 1.19
SSBP4-210ENST00000601444 PP2D1A8MPX8 630 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 LAD1O00515 517 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 MAGEB2O15479 319 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 GHRP10912 638 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 MKRN4PQ13434 485 aaPredicted RBP22.46■■□□□ 1.19
SSBP4-210ENST00000601444 TMEM266Q2M3C6 531 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 FOXD4L5Q5VV16 416 aaPredicted RBP22.46■■□□□ 1.19
SSBP4-210ENST00000601444 NME8Q8N427 588 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 IGSF22Q8N9C0 903 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 FOXD4L4Q8WXT5 416 aaPredicted RBP22.46■■□□□ 1.19
SSBP4-210ENST00000601444 CEP170P1Q96L14 293 aa22.46■■□□□ 1.19
SSBP4-210ENST00000601444 TET1Q8NFU7 2136 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 TRIOBPQ9H2D6 2365 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 ZBBXA8MT70 800 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 GRXCR1A8MXD5 290 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 LYPLA2O95372 231 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 CDC25AP30304 524 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 PRPHP41219 470 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 PKP1Q13835 747 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 LPIN1Q14693 890 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 SF3A1Q15459 793 aaKnown RBP22.45■■□□□ 1.18
SSBP4-210ENST00000601444 ECM1Q16610 540 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 PLEKHG4Q58EX7 1191 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 IER5Q5VY09 327 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 CNKSR3Q6P9H4 555 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 DTHD1Q6ZMT9 781 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 NEK9Q8TD19 979 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 PIGOQ8TEQ8 1089 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 ZNF668Q96K58 619 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-210ENST00000601444 CELF4Q9BZC1 486 aaKnown RBP22.45■■□□□ 1.18
SSBP4-210ENST00000601444 BMP2KQ9NSY1 1161 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-210ENST00000601444 LRWD1Q9UFC0 647 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 GINS2Q9Y248 185 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 TRPV2Q9Y5S1 764 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 CLIC4Q9Y696 253 aa22.45■■□□□ 1.18
SSBP4-210ENST00000601444 IGKV6-21A0A0C4DH24 114 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 MAFO75444 373 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-210ENST00000601444 ACTN1P12814 892 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 PDIA5Q14554 519 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 KIZQ2M2Z5 673 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 XKR9Q5GH70 373 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 FBXO47Q5MNV8 452 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 POLR3CQ9BUI4 534 aaPredicted RBP22.44■■□□□ 1.18
SSBP4-210ENST00000601444 AGO3Q9H9G7 860 aaKnown RBP22.44■■□□□ 1.18
SSBP4-210ENST00000601444 TUFT1Q9NNX1 390 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 AKT3Q9Y243 479 aa22.44■■□□□ 1.18
SSBP4-210ENST00000601444 SIP14410 1827 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 VWA3AA6NCI4 1184 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 GPR32O75388 356 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms