RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CDCA2Q69YH5 1023 aaPredicted RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 GGT6Q6P531 493 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 UBE2R2Q712K3 238 aaPredicted RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 SAPCD2Q86UD0 394 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PROSER1Q86XN7 944 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 DHX37Q8IY37 1157 aaKnown RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 KYQ8NBH2 561 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZBTB8AQ96BR9 441 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 WASF3Q9UPY6 502 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PLAAQ9Y263 795 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PRDM15P57071 1507 aaPredicted RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 CAMSAP1Q5T5Y3 1602 aa5.15□□□□□ -1.58
CKS1BP3-201ENST00000600888 NCOA1Q15788 1441 aa5.15□□□□□ -1.58
CKS1BP3-201ENST00000600888 A2ML1A8K2U0 1454 aa5.15□□□□□ -1.58
CKS1BP3-201ENST00000600888 ADGRL2O95490 1459 aa5.15□□□□□ -1.58
CKS1BP3-201ENST00000600888 ABCC3O15438 1527 aa5.15□□□□□ -1.58
CKS1BP3-201ENST00000600888 SLC12A8A0AV02 714 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 FFAR3O14843 346 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 GJA4P35212 333 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 GYS2P54840 703 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 SMAD4Q13485 552 aaKnown RBP5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 VMACQ2NL98 169 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 CFAP100Q494V2 611 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 VWA3BQ502W6 1294 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 CNNM4Q6P4Q7 775 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 LRRTM3Q86VH5 581 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 TTLL6Q8N841 843 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 C2orf69Q8N8R5 385 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 WNK4Q96J92 1243 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 RIC8BQ9NVN3 520 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 SPATA6Q9NWH7 488 aaPredicted RBP5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 RBPJLQ9UBG7 517 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 SPATA31D1Q6ZQQ2 1576 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 VWDEQ8N2E2 1590 aa5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 KDM5AP29375 1690 aaKnown RBP5.15□□□□□ -1.59
CKS1BP3-201ENST00000600888 NLRP1Q9C000 1473 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 FAM83GA6ND36 823 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 TRAF5O00463 557 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 SCDO00767 359 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ENO2P09104 434 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ZBTB48P10074 688 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 POU3F2P20265 443 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 JAG1P78504 1218 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 DLX2Q07687 328 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ADAM9Q13443 819 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 SEC23AQ15436 765 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ARHGAP44Q17R89 818 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 TM4SF20Q53R12 229 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 PIK3R6Q5UE93 754 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 TMC5Q6UXY8 1006 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 OTOP1Q7RTM1 612 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 SIAH1Q8IUQ4 282 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 NOSTRINQ8IVI9 506 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 LINC01356Q8N9X3 169 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ZNF526Q8TF50 670 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 DDX1Q92499 740 aaKnown RBP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 MFSD3Q96ES6 412 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 TMEM209Q96SK2 561 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 MTFR1LQ9H019 292 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ADAMTS20P59510 1910 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 WASHC2CQ9Y4E1 1318 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ANKRD30AQ9BXX3 1397 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 KIF15Q9NS87 1388 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 ARHGAP31Q2M1Z3 1444 aa5.14□□□□□ -1.59
CKS1BP3-201ENST00000600888 LMTK2Q8IWU2 1503 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 SH3D21A4FU49 640 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 SMARCA5O60264 1052 aaPredicted RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 C4BPAP04003 597 aaKnown RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 ZSCAN22P10073 491 aaPredicted RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 NEK4P51957 841 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 DBPQ10586 325 aaPredicted RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 CD276Q5ZPR3 534 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 CPZQ66K79 652 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 VASNQ6EMK4 673 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 FSTL4Q6MZW2 842 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 LIPIQ6XZB0 460 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 LCNL1Q6ZST4 164 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 TTLL7Q6ZT98 887 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 ADGRG2Q8IZP9 1017 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 TP53I13Q8NBR0 393 aaPredicted RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 CHST14Q8NCH0 376 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 FBXO41Q8TF61 875 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 DLG3Q92796 817 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 ORAI3Q9BRQ5 295 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 TARS2Q9BW92 718 aaKnown RBP5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 CABP5Q9NP86 173 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 IQSEC2Q5JU85 1478 aa5.13□□□□□ -1.59
CKS1BP3-201ENST00000600888 LTBP4Q8N2S1 1624 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 GCC2Q8IWJ2 1684 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 UBR1Q8IWV7 1749 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 A0A1B0GTL3 188 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 PTPDC1A2A3K4 754 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 CBX4O00257 560 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 KPNA6O60684 536 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 CLSTN1O94985 981 aa5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 RPL13P26373 211 aaKnown RBP5.12□□□□□ -1.59
CKS1BP3-201ENST00000600888 THBS2P35442 1172 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms