RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
SDF2-208ENST00000589788 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 LLPHQ9BRT6 129 aaKnown RBP11.74□□□□□ -0.53
SDF2-208ENST00000589788 WNT8AQ9H1J5 351 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 IL23AQ9NPF7 189 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 GJB4Q9NTQ9 266 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 TBC1D22BQ9NU19 505 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 TRIP12Q14669 1992 aaPredicted RBP11.73□□□□□ -0.53
SDF2-208ENST00000589788 EMSYQ7Z589 1322 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 BACH1O14867 736 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 TLL1O43897 1013 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 ACRP10323 421 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 KRT2P35908 639 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 ZNF200P98182 395 aaPredicted RBP11.73□□□□□ -0.53
SDF2-208ENST00000589788 ST3GAL1Q11201 340 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 PTPRNQ16849 979 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 INF2Q27J81 1249 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 LRIT3Q3SXY7 679 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 MIS18BP1Q6P0N0 1132 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 PSRC1Q6PGN9 363 aaPredicted RBP11.73□□□□□ -0.53
SDF2-208ENST00000589788 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
SDF2-208ENST00000589788 SCLYQ96I15 445 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
SDF2-208ENST00000589788 LGR5O75473 907 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 CCNE2O96020 404 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 IQCF3P0C7M6 154 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 RFC2P35250 354 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 STAT5BP51692 787 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 HMGN5P82970 282 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 KRT76Q01546 638 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
SDF2-208ENST00000589788 LETM2Q2VYF4 491 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 ZNF365Q70YC5 407 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 DEFB128Q7Z7B8 93 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 NEK8Q86SG6 692 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 AFAP1L1Q8TED9 768 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 LENG9Q96B70 501 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 CTAGE1Q96RT6 745 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 NAP1L4Q99733 375 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.53
SDF2-208ENST00000589788 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 SETD4Q9NVD3 440 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 MAP10Q9P2G4 905 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 RBM19Q9Y4C8 960 aaKnown RBP11.72□□□□□ -0.53
SDF2-208ENST00000589788 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
SDF2-208ENST00000589788 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 CYP3A7-CYP3A51PA0A087WV96 503 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.53
SDF2-208ENST00000589788 MSH4O15457 936 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 DHX15O43143 795 aaKnown RBP11.71□□□□□ -0.53
SDF2-208ENST00000589788 GAS7O60861 476 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.53
SDF2-208ENST00000589788 TDP2O95551 362 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 FGBP02675 491 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 MMP1P03956 469 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 PFKMP08237 780 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 CKBP12277 381 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SELPP16109 830 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 CYP3A7P24462 503 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 HOXC8P31273 242 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 THPOP40225 353 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SLC26A2P50443 739 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 PPFIA1Q13136 1202 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 Q4G0T1 1027 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 TMEM240Q5SV17 173 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 KRT40Q6A162 431 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
SDF2-208ENST00000589788 MOXD1Q6UVY6 613 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 LRRC8DQ7L1W4 858 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 C16orf59Q7L2K0 433 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 PLPPR4Q7Z2D5 763 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SMAP1Q8IYB5 467 aaPredicted RBP11.71□□□□□ -0.53
SDF2-208ENST00000589788 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 C8orf76Q96K31 380 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 RIT2Q99578 217 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SPSB2Q99619 263 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
SDF2-208ENST00000589788 DDX25Q9UHL0 483 aaKnown RBP11.71□□□□□ -0.53
SDF2-208ENST00000589788 SAMM50Q9Y512 469 aa11.71□□□□□ -0.53
SDF2-208ENST00000589788 SCN5AQ14524 2016 aa11.71□□□□□ -0.54
SDF2-208ENST00000589788 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
SDF2-208ENST00000589788 TREHO43280 583 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 EDIL3O43854 480 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 ATG7O95352 703 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 PSAPP07602 524 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 ACTN1P12814 892 aa11.7□□□□□ -0.54
SDF2-208ENST00000589788 GCFC2P16383 781 aaKnown RBP11.7□□□□□ -0.54
SDF2-208ENST00000589788 MCM2P49736 904 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms