RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ATG4CQ96DT6 458 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 KIF1BPQ96EK5 621 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 GLT1D1Q96MS3 346 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 DNAJC2Q99543 621 aaKnown RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 KRTAP4-5Q9BYR2 181 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 MTIF3Q9H2K0 278 aaKnown RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF287Q9HBT7 754 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 KANSL3Q9P2N6 904 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 EXOC6BQ9Y2D4 811 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 MYO5AQ9Y4I1 1855 aaKnown RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 LAMA3Q16787 3333 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
DNMT1-220ENST00000589351 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ANKRD62A6NC57 917 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 FAM170BA6NMN3 283 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 VWA5AO00534 786 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 RAB11FIP3O75154 756 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ELP1O95163 1332 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 PGK1P00558 417 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 TIMP1P01033 207 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 EEF2P13639 858 aaKnown RBP6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ACLYP53396 1101 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
DNMT1-220ENST00000589351 C19orf57Q0VDD7 668 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 RLFQ13129 1914 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 PPIGQ13427 754 aaKnown RBP eCLIP6.63□□□□□ -1.356e-9■■■□□ 15.2
DNMT1-220ENST00000589351 TMEM132BQ14DG7 1078 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF792Q3KQV3 632 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 C12orf60Q5U649 245 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 MFSD5Q6N075 450 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 CEP85Q6P2H3 762 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ANKRD33Q7Z3H0 272 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ZAR1Q86SH2 424 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 PRPF38AQ8NAV1 312 aaKnown RBP6.63□□□□□ -1.35
DNMT1-220ENST00000589351 DYNLL2Q96FJ2 89 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 TBC1D32Q96NH3 1257 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 SYNGAP1Q96PV0 1343 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 BCL11AQ9H165 835 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ARMT1Q9H993 441 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 SUGCTQ9HAC7 445 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 MKNK2Q9HBH9 465 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 IL1RAPL2Q9NP60 686 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 PAG1Q9NWQ8 432 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF236Q9UL36 1845 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ADAMTS5Q9UNA0 930 aa6.63□□□□□ -1.35
DNMT1-220ENST00000589351 ZNFX1Q9P2E3 1918 aaKnown RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 DNAH12Q6ZR08 3092 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 DUSP11O75319 330 aaKnown RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 MBD4O95243 580 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 DLGAP3O95886 979 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 PGK2P07205 417 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF865P0CJ78 1059 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 DRD2P14416 443 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 AKR1B1P15121 316 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ARL4DP49703 201 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 FAAP100Q0VG06 881 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 UBE3CQ15386 1083 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 KCNA10Q16322 511 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 GIMAP6Q6P9H5 292 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF662Q6ZS27 426 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 CAPN12Q6ZSI9 719 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 C16orf86Q6ZW13 317 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 SIAH1Q8IUQ4 282 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF444Q8N0Y2 327 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ANKRD35Q8N283 1001 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 LCORLQ8N3X6 602 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 TIFAQ96CG3 184 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 HHIPQ96QV1 700 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 SLF1Q9BQI6 1058 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 TEX13BQ9BXU2 312 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 SEZ6LQ9BYH1 1024 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 TTYH1Q9H313 450 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ABHD16BQ9H3Z7 469 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 TMEM63CQ9P1W3 806 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 FBXO40Q9UH90 709 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 MSRAQ9UJ68 235 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 ZHX1Q9UKY1 873 aaPredicted RBP6.62□□□□□ -1.35
DNMT1-220ENST00000589351 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 SOX13Q9UN79 622 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 SLC4A4Q9Y6R1 1079 aa6.62□□□□□ -1.35
DNMT1-220ENST00000589351 SMCHD1A6NHR9 2005 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 A0A0U1RQG5 324 aaPredicted RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 TCRBV5S4A2TA0A5A2 114 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 F5H6K3 240 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ARVCFO00192 962 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ZBTB39O15060 712 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ZEB2O60315 1214 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 PRMT3O60678 531 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 CABYRO75952 493 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 CLSTN1O94985 981 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 FGBP02675 491 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ATP5JP18859 108 aa6.61□□□□□ -1.35
DNMT1-220ENST00000589351 NCLP19338 710 aaKnown RBP6.61□□□□□ -1.35
DNMT1-220ENST00000589351 ADD2P35612 726 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms