RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 FSD2A1L4K1 749 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
GGA3-219ENST00000584550 CYP21A2P08686 494 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 FGFR1P11362 822 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 CA8P35219 290 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 PBX3P40426 434 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 SARSP49591 514 aaKnown RBP11.7□□□□□ -0.54
GGA3-219ENST00000584550 CLCN5P51795 746 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 TRDNQ13061 729 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 PDE12Q6L8Q7 609 aaKnown RBP11.7□□□□□ -0.54
GGA3-219ENST00000584550 CES5AQ6NT32 575 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 KANK3Q6NY19 840 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 NLRX1Q86UT6 975 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 KIAA2013Q8IYS2 634 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 CELF4Q9BZC1 486 aaKnown RBP11.7□□□□□ -0.54
GGA3-219ENST00000584550 KRT23Q9C075 422 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 TAF6LQ9Y6J9 622 aa11.7□□□□□ -0.54
GGA3-219ENST00000584550 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 DENND3A2RUS2 1198 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 CYTH3O43739 400 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 HOXB8P17481 243 aaPredicted RBP11.69□□□□□ -0.54
GGA3-219ENST00000584550 KRT76Q01546 638 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 ANGPT1Q15389 498 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 CWF19L1Q69YN2 538 aaKnown RBP11.69□□□□□ -0.54
GGA3-219ENST00000584550 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 TMC7Q7Z402 723 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 C12orf76Q8N812 135 aaPredicted RBP11.69□□□□□ -0.54
GGA3-219ENST00000584550 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
GGA3-219ENST00000584550 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
GGA3-219ENST00000584550 ADAM2Q99965 735 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 ADAM7Q9H2U9 754 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 CWH43Q9H720 699 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 CNNM2Q9H8M5 875 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 PUF60Q9UHX1 559 aaKnown RBP11.69□□□□□ -0.54
GGA3-219ENST00000584550 SQORQ9Y6N5 450 aa11.69□□□□□ -0.54
GGA3-219ENST00000584550 LAMA4Q16363 1823 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 RRN3P2A6NIE6 340 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 E7EWF7 191 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 KCNA2P16389 499 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 TRAF1Q13077 416 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 PLCB4Q15147 1175 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 RARS2Q5T160 578 aaKnown RBP11.68□□□□□ -0.54
GGA3-219ENST00000584550 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
GGA3-219ENST00000584550 RASGRP4Q8TDF6 673 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 CASP10Q92851 521 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 PPP1R16BQ96T49 567 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
GGA3-219ENST00000584550 NOC2LQ9Y3T9 749 aaKnown RBP11.68□□□□□ -0.54
GGA3-219ENST00000584550 PCDHA2Q9Y5H9 948 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 HCFC2Q9Y5Z7 792 aa11.68□□□□□ -0.54
GGA3-219ENST00000584550 STK25O00506 426 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 SLC27A2O14975 620 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 NPR3P17342 541 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 ITGB5P18084 799 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 LAG3P18627 525 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 SEC23AQ15436 765 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 CREB3L3Q68CJ9 461 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 TDRD5Q8NAT2 981 aaKnown RBP11.67□□□□□ -0.54
GGA3-219ENST00000584550 NCOA7Q8NI08 942 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 FEZF2Q8TBJ5 459 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 CNTNAP3BQ96NU0 1288 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 NECTIN4Q96NY8 510 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 PCYT2Q99447 389 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 HINFPQ9BQA5 517 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 CNTNAP3Q9BZ76 1288 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 ATP6V0A4Q9HBG4 840 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 SENP2Q9HC62 589 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 ERVK-5Q9HDB9 667 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 NGRNQ9NPE2 291 aaKnown RBP11.67□□□□□ -0.54
GGA3-219ENST00000584550 RGS18Q9NS28 235 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 ST3GAL5Q9UNP4 418 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 LZTS1Q9Y250 596 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 R4GN57 208 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
GGA3-219ENST00000584550 IFIT3O14879 490 aaKnown RBP11.66□□□□□ -0.54
GGA3-219ENST00000584550 CLASP2O75122 1294 aaKnown RBP11.66□□□□□ -0.54
GGA3-219ENST00000584550 LMNAP02545 664 aaKnown RBP11.66□□□□□ -0.54
GGA3-219ENST00000584550 AOC1P19801 751 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 MTHFRP42898 656 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 PLCB3Q01970 1234 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 KRT17Q04695 432 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 ITIH3Q06033 890 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 GRM4Q14833 912 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 KCNT2Q6UVM3 1135 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 CCDC105Q8IYK2 499 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 DTWD2Q8NBA8 298 aa11.66□□□□□ -0.54
GGA3-219ENST00000584550 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms