RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CELF4Q9BZC1 486 aaKnown RBP23.02■■□□□ 1.28
SS18-224ENST00000584083 ZNF862O60290 1169 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 ARHGEF15O94989 841 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 UPP2O95045 317 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 OATP04181 439 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 PRKCEQ02156 737 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 UGCGQ16739 394 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 DIS3L2Q8IYB7 885 aaKnown RBP23.01■■□□□ 1.27
SS18-224ENST00000584083 KIAA0319LQ8IZA0 1049 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 METTL13Q8N6R0 699 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 ARNTL2Q8WYA1 636 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 FAM20AQ96MK3 541 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 LLPHQ9BRT6 129 aaKnown RBP23.01■■□□□ 1.27
SS18-224ENST00000584083 SH2B1Q9NRF2 756 aaPredicted RBP23.01■■□□□ 1.27
SS18-224ENST00000584083 GINS2Q9Y248 185 aa23.01■■□□□ 1.27
SS18-224ENST00000584083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23■■□□□ 1.27
SS18-224ENST00000584083 BTBD18B2RXH4 712 aa23■■□□□ 1.27
SS18-224ENST00000584083 C22orf31O95567 290 aa23■■□□□ 1.27
SS18-224ENST00000584083 GUCY1B3Q02153 619 aa23■■□□□ 1.27
SS18-224ENST00000584083 ADGRE1Q14246 886 aa23■■□□□ 1.27
SS18-224ENST00000584083 RABEP1Q15276 862 aa23■■□□□ 1.27
SS18-224ENST00000584083 USP38Q8NB14 1042 aa23■■□□□ 1.27
SS18-224ENST00000584083 TNFRSF25Q93038 417 aa23■■□□□ 1.27
SS18-224ENST00000584083 AGO3Q9H9G7 860 aaKnown RBP23■■□□□ 1.27
SS18-224ENST00000584083 INSL6Q9Y581 213 aa23■■□□□ 1.27
SS18-224ENST00000584083 SQORQ9Y6N5 450 aa23■■□□□ 1.27
SS18-224ENST00000584083 MAGEB2O15479 319 aa22.99■■□□□ 1.27
SS18-224ENST00000584083 CD52P31358 61 aa22.99■■□□□ 1.27
SS18-224ENST00000584083 SAFBQ15424 915 aaKnown RBP eCLIP22.99■■□□□ 1.27
SS18-224ENST00000584083 B3GNT9Q6UX72 402 aa22.99■■□□□ 1.27
SS18-224ENST00000584083 TOP1MTQ969P6 601 aa22.99■■□□□ 1.27
SS18-224ENST00000584083 KCNMB3Q9NPA1 279 aa22.99■■□□□ 1.27
SS18-224ENST00000584083 CHD7Q9P2D1 2997 aa22.99■■□□□ 1.27
SS18-224ENST00000584083 CDH23Q9H251 3354 aa22.98■■□□□ 1.27
SS18-224ENST00000584083 RFXAPO00287 272 aa22.98■■□□□ 1.27
SS18-224ENST00000584083 BAG4O95429 457 aaKnown RBP22.98■■□□□ 1.27
SS18-224ENST00000584083 POTEDQ86YR6 584 aa22.98■■□□□ 1.27
SS18-224ENST00000584083 PPM1EQ8WY54 764 aa22.98■■□□□ 1.27
SS18-224ENST00000584083 C8orf76Q96K31 380 aa22.98■■□□□ 1.27
SS18-224ENST00000584083 SEPT9Q9UHD8 586 aaPredicted RBP22.98■■□□□ 1.27
SS18-224ENST00000584083 KDM3AQ9Y4C1 1321 aa22.98■■□□□ 1.27
SS18-224ENST00000584083 ENPP3O14638 875 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 TBX3O15119 743 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 ST18O60284 1047 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 HMGN5P82970 282 aaKnown RBP22.97■■□□□ 1.27
SS18-224ENST00000584083 PAK2Q13177 524 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 PPP2R5CQ13362 524 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 EFCAB12Q6NXP0 572 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 FAM184AQ8NB25 1140 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 BANK1Q8NDB2 785 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 PPP1R16BQ96T49 567 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 YME1L1Q96TA2 773 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 VAV3Q9UKW4 847 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 PADI3Q9ULW8 664 aa22.97■■□□□ 1.27
SS18-224ENST00000584083 EML1O00423 815 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 VTNP04004 478 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 TMOD1P28289 359 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 CLCN3P51790 818 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 HTRA4P83105 476 aaPredicted RBP22.96■■□□□ 1.27
SS18-224ENST00000584083 XKR3Q5GH77 459 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 SPRED2Q7Z698 418 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 SLFN12Q8IYM2 578 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 HAS1Q92839 578 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 MAP7D2Q96T17 732 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 SUGCTQ9HAC7 445 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 CDHR5Q9HBB8 845 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 MTUS1Q9ULD2 1270 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 AKT3Q9Y243 479 aa22.96■■□□□ 1.27
SS18-224ENST00000584083 LINC01553A4QN01 128 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 EPOPA6NHQ4 379 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 TTC3P53804 2025 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 PSMC5P62195 406 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 TBC1D8BQ0IIM8 1120 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 NFX1Q12986 1120 aaKnown RBP22.95■■□□□ 1.26
SS18-224ENST00000584083 CCDC85BQ15834 202 aaPredicted RBP22.95■■□□□ 1.26
SS18-224ENST00000584083 KIZQ2M2Z5 673 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 TMEM266Q2M3C6 531 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 MTERF2Q49AM1 385 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 LRRC71Q8N4P6 559 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 TGS1Q96RS0 853 aaKnown RBP22.95■■□□□ 1.26
SS18-224ENST00000584083 FTHL17Q9BXU8 183 aa22.95■■□□□ 1.26
SS18-224ENST00000584083 GTPBP6O43824 516 aaPredicted RBP22.94■■□□□ 1.26
SS18-224ENST00000584083 RPS6KA5O75582 802 aa22.94■■□□□ 1.26
SS18-224ENST00000584083 CRYBB1P53674 252 aaPredicted RBP22.94■■□□□ 1.26
SS18-224ENST00000584083 NCAPH2Q6IBW4 605 aa22.94■■□□□ 1.26
SS18-224ENST00000584083 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.94■■□□□ 1.26
SS18-224ENST00000584083 MICALL1Q8N3F8 863 aa22.94■■□□□ 1.26
SS18-224ENST00000584083 NIFKQ9BYG3 293 aaKnown RBP22.94■■□□□ 1.26
SS18-224ENST00000584083 NOC2LQ9Y3T9 749 aaKnown RBP22.94■■□□□ 1.26
SS18-224ENST00000584083 TMEM150BA6NC51 233 aa22.93■■□□□ 1.26
SS18-224ENST00000584083 DKC1O60832 514 aaKnown RBP eCLIP22.93■■□□□ 1.26
SS18-224ENST00000584083 ATP2B1P20020 1258 aa22.93■■□□□ 1.26
SS18-224ENST00000584083 QARSP47897 775 aaKnown RBP22.93■■□□□ 1.26
SS18-224ENST00000584083 ERVK-21P61565 698 aa22.93■■□□□ 1.26
SS18-224ENST00000584083 TARBP2Q15633 366 aaKnown RBP22.93■■□□□ 1.26
SS18-224ENST00000584083 CALCRLQ16602 461 aa22.93■■□□□ 1.26
SS18-224ENST00000584083 ODR4Q5SWX8 454 aa22.93■■□□□ 1.26
SS18-224ENST00000584083 OSMRQ99650 979 aa22.93■■□□□ 1.26
SS18-224ENST00000584083 EYSQ5T1H1 3165 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms