RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 ME3Q16798 604 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 TCTN1Q2MV58 587 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 Q4G0T1 1027 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 MIER3Q7Z3K6 550 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 TMCO2Q7Z6W1 182 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-210ENST00000580074 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 PPP2R3CQ969Q6 453 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 C11orf84Q9BUA3 381 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-210ENST00000580074 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
ERBB2-210ENST00000580074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-210ENST00000580074 DENND3A2RUS2 1198 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 MARCH6O60337 910 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 PPFIA3O75145 1194 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 RPS6KA5O75582 802 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 OATP04181 439 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 CD52P31358 61 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 TRIM29Q14134 588 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-210ENST00000580074 METTL13Q8N6R0 699 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 HLA-CQ95604 372 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
ERBB2-210ENST00000580074 LMAN2LQ9H0V9 348 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
ERBB2-210ENST00000580074 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
ERBB2-210ENST00000580074 PRRC2BQ5JSZ5 2229 aaKnown RBP13.17□□□□□ -0.3
ERBB2-210ENST00000580074 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 RFXAPO00287 272 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 MSH4O15457 936 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 CHMP2AO43633 222 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 ARHGEF15O94989 841 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 CTNNB1P35222 781 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 DNM2P50570 870 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 CRYBB1P53674 252 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 PRKCEQ02156 737 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 TBC1D8BQ0IIM8 1120 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 GPM6BQ13491 265 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 EPC2Q52LR7 807 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 B3GNT9Q6UX72 402 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 TMEM192Q8IY95 271 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 EXOC8Q8IYI6 725 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 CMTR2Q8IYT2 770 aaKnown RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 MRPL38Q96DV4 380 aaKnown RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 KIF2CQ99661 725 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
ERBB2-210ENST00000580074 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
ERBB2-210ENST00000580074 TTC3P53804 2025 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 H3BNC9 293 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 ENPP3O14638 875 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 TBX3O15119 743 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 HOXA2O43364 376 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 NCK2O43639 380 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
ERBB2-210ENST00000580074 C22orf31O95567 290 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 KRT2P35908 639 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 LETM2Q2VYF4 491 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 NAALADL2Q58DX5 795 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.3
ERBB2-210ENST00000580074 ADAMTS19Q8TE59 1207 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 ZSCAN31Q96LW9 406 aaPredicted RBP13.15□□□□□ -0.3
ERBB2-210ENST00000580074 FAM20AQ96MK3 541 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 C17orf80Q9BSJ5 609 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 FAM50BQ9Y247 325 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 PPME1Q9Y570 386 aa13.15□□□□□ -0.3
ERBB2-210ENST00000580074 WDR81Q562E7 1941 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 EVPLQ92817 2033 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 LPXNO60711 386 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 PSMD10O75832 226 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 TDP2O95551 362 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-210ENST00000580074 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
ERBB2-210ENST00000580074 INF2Q27J81 1249 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 TRMT1LQ7Z2T5 733 aaKnown RBP13.14□□□□□ -0.31
ERBB2-210ENST00000580074 SLFN12Q8IYM2 578 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 UHRF1Q96T88 793 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-210ENST00000580074 UNC45AQ9H3U1 944 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 AGO3Q9H9G7 860 aaKnown RBP13.14□□□□□ -0.31
ERBB2-210ENST00000580074 PRDM6Q9NQX0 595 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 SH2B1Q9NRF2 756 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms