RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 LRRC8DQ7L1W4 858 aa13.35□□□□□ -0.27
TRIM25-205ENST00000572021 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
TRIM25-205ENST00000572021 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
TRIM25-205ENST00000572021 FAM167AQ96KS9 214 aa13.35□□□□□ -0.27
TRIM25-205ENST00000572021 NRBP2Q9NSY0 501 aa13.35□□□□□ -0.27
TRIM25-205ENST00000572021 CLIC4Q9Y696 253 aa13.35□□□□□ -0.27
TRIM25-205ENST00000572021 SIP14410 1827 aa13.35□□□□□ -0.27
TRIM25-205ENST00000572021 TET1Q8NFU7 2136 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 C22orf31O95567 290 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 PDIA4P13667 645 aaKnown RBP13.34□□□□□ -0.27
TRIM25-205ENST00000572021 NPEPPSP55786 919 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 MBTPS1Q14703 1052 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 GPNMBQ14956 572 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
TRIM25-205ENST00000572021 SHHQ15465 462 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 ZNF484Q5JVG2 852 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 LRRC71Q8N4P6 559 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 METTL13Q8N6R0 699 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
TRIM25-205ENST00000572021 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
TRIM25-205ENST00000572021 LOXHD1Q8IVV2 1947 aa13.33□□□□□ -0.27
TRIM25-205ENST00000572021 NBNO60934 754 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 MED24O75448 989 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 CDC25AP30304 524 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 CLCN3P51790 818 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
TRIM25-205ENST00000572021 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.281e-7■■□□□ 14.1
TRIM25-205ENST00000572021 TMEM266Q2M3C6 531 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 XKR3Q5GH77 459 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 HSD17B14Q9BPX1 270 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.285e-13■■■□□ 18.9
TRIM25-205ENST00000572021 IL23AQ9NPF7 189 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 COL1A2P08123 1366 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 ARID2Q68CP9 1835 aa13.33□□□□□ -0.28
TRIM25-205ENST00000572021 VWA3AA6NCI4 1184 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CHRNA1P02708 482 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 SPATA31C1P0DKV0 1188 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 ZSCAN22P10073 491 aaPredicted RBP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 BMP8BP34820 402 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 RBL2Q08999 1139 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TARBP2Q15633 366 aaKnown RBP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TMEM240Q5SV17 173 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TAF2Q6P1X5 1199 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 OTOP2Q7RTS6 562 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 ZNF668Q96K58 619 aaPredicted RBP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 NIFKQ9BYG3 293 aaKnown RBP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 LAMA3Q16787 3333 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 LAD1O00515 517 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 VTNP04004 478 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 YWHABP31946 246 aaKnown RBP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 GRIN1Q05586 938 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TBC1D8BQ0IIM8 1120 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 DRP2Q13474 957 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 ECM1Q16610 540 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 KLHL40Q2TBA0 621 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 EFCAB12Q6NXP0 572 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 C4orf19Q8IY42 314 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 KIAA0319LQ8IZA0 1049 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CEP170P1Q96L14 293 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CYP26B1Q9NR63 512 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TFIP11Q9UBB9 837 aaKnown RBP13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 CDY2AQ9Y6F7 541 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 TRIOBPQ9H2D6 2365 aa13.32□□□□□ -0.28
TRIM25-205ENST00000572021 SMIM35A0A1B0GVV1 85 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
TRIM25-205ENST00000572021 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
TRIM25-205ENST00000572021 PRPHP41219 470 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 MRPS6P82932 125 aaKnown RBP13.31□□□□□ -0.28
TRIM25-205ENST00000572021 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
TRIM25-205ENST00000572021 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 IGSF22Q8N9C0 903 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 ERMNQ8TAM6 284 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 USP28Q96RU2 1077 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
TRIM25-205ENST00000572021 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 LMBRD1Q9NUN5 540 aa13.31□□□□□ -0.28
TRIM25-205ENST00000572021 CXXC1Q9P0U4 656 aaPredicted RBP13.31□□□□□ -0.28
TRIM25-205ENST00000572021 DKC1O60832 514 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM25-205ENST00000572021 F13A1P00488 732 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 FGBP02675 491 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 GHRP10912 638 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms