RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 NRDE2Q9H7Z3 1164 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 PTGFRNQ9P2B2 879 aa4.93□□□□□ -1.62
HDGFL3-202ENST00000562702 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 DLX3O60479 287 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 PTPN1P18031 435 aaKnown RBP4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 IL13RA1P78552 427 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 GSPT2Q8IYD1 628 aaKnown RBP4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 HAS1Q92839 578 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 BTBD2Q9BX70 525 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 ZNF408Q9H9D4 720 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 Q9UFV3 132 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 CDC42EP3Q9UKI2 254 aa4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 R3HCC1Q9Y3T6 440 aaKnown RBP4.92□□□□□ -1.62
HDGFL3-202ENST00000562702 A0A1W2PRX2 142 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 IQCA1LA6NCM1 817 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 PPFIA4O75335 1185 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 ADRA1BP35368 520 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 IL12RB1P42701 662 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 SLC10A6Q3KNW5 377 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 TRIM68Q6AZZ1 485 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 NPM2Q86SE8 214 aaKnown RBP4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 RPUSD2Q8IZ73 545 aaKnown RBP4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 SYNE4Q8N205 404 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 MIEF2Q96C03 454 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 WNK4Q96J92 1243 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 RIOX1Q9H6W3 641 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 ZNHIT2Q9UHR6 403 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 SRPK3Q9UPE1 567 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 ATP23Q9Y6H3 246 aa4.91□□□□□ -1.62
HDGFL3-202ENST00000562702 A0A1W2PQU0 124 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 TRAF5O00463 557 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 RPS6KA4O75676 772 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 CAPNS1P04632 268 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 ETFBP38117 255 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 MAN2A2P49641 1150 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 COL10A1Q03692 680 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 RIN1Q13671 783 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 STILQ15468 1287 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 SPTY2D1Q68D10 685 aaPredicted RBP4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 KCNT2Q6UVM3 1135 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 LPPQ93052 612 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 TANGO6Q9C0B7 1094 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 IPPKQ9H8X2 491 aa4.9□□□□□ -1.63
HDGFL3-202ENST00000562702 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 PRAMEF25A6NGN4 478 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 STK10O94804 968 aaKnown RBP4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 HERVK_113P62684 666 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 HGFACQ04756 655 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 GPR19Q15760 415 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 GRAMD4Q6IC98 578 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 MRM1Q6IN84 353 aaKnown RBP4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 STYK1Q6J9G0 422 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 Q6ZPA2 131 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 ARHGAP36Q6ZRI8 547 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 SGSM3Q96HU1 749 aa4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 AARSD1Q9BTE6 412 aaKnown RBP4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 ADARB2Q9NS39 739 aaKnown RBP4.89□□□□□ -1.63
HDGFL3-202ENST00000562702 MASP2O00187 686 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 PRODHO43272 600 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 LMNAP02545 664 aaKnown RBP4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 ATP2B1P20020 1258 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 AOAHP28039 575 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 ECE1P42892 770 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 MAP3K12Q12852 859 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 PTPAQ15257 358 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 SF3A1Q15459 793 aaKnown RBP4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 FIGNQ5HY92 759 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 TMEM200BQ69YZ2 307 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 SYCE2Q6PIF2 218 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 ANKS3Q6ZW76 656 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 SLC25A43Q8WUT9 341 aaPredicted RBP4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 RABGGTAQ92696 567 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 ZNF764Q96H86 408 aaPredicted RBP4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 GPRC5BQ9NZH0 403 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 PACSIN3Q9UKS6 424 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 SH3BP1Q9Y3L3 701 aa4.88□□□□□ -1.63
HDGFL3-202ENST00000562702 FAM90A27PA6NNH2 459 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 GSTA4O15217 222 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 GJB6O95452 261 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 FGFR1P11362 822 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 CD38P28907 300 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 SESN2P58004 480 aaPredicted RBP4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 CD83Q01151 205 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 PAK1Q13153 545 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 MOGSQ13724 837 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 LY6G5CQ5SRR4 150 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 STRIP1Q5VSL9 837 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 ZKSCAN2Q63HK3 967 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 NSMFQ6X4W1 530 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 SH3RF2Q8TEC5 729 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 HNRNPLLQ8WVV9 542 aaKnown RBP4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 TRIM55Q9BYV6 548 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 OR10A5Q9H207 317 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 CATSPERZQ9NTU4 200 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 PPP1R1BQ9UD71 204 aaPredicted RBP4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 VWA7Q9Y334 891 aa4.87□□□□□ -1.63
HDGFL3-202ENST00000562702 SCNN1GP51170 649 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms