RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TLL1O43897 1013 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 CTSHP09668 335 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 XRCC6P12956 609 aaKnown RBP eCLIP7.81□□□□□ -1.16
SPG11-224ENST00000561268 GNA11P29992 359 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 TERF1P54274 439 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 ZNF445P59923 1031 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 SP4Q02446 784 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 IKBKEQ14164 716 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 LPIN1Q14693 890 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 COL19A1Q14993 1142 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 PLCB4Q15147 1175 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 FBXO47Q5MNV8 452 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 UTP14CQ5TAP6 766 aaKnown RBP7.81□□□□□ -1.16
SPG11-224ENST00000561268 ZNF746Q6NUN9 644 aaPredicted RBP7.81□□□□□ -1.16
SPG11-224ENST00000561268 MOXD1Q6UVY6 613 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 LINC01465Q8N7H1 131 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 ATP8B4Q8TF62 1192 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 ATXN2LQ8WWM7 1075 aaKnown RBP7.81□□□□□ -1.16
SPG11-224ENST00000561268 LINC01599Q8WXQ3 324 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 SEPT8Q92599 483 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 PHKBQ93100 1093 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 TOP1MTQ969P6 601 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 RAD9AQ99638 391 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 SDF4Q9BRK5 362 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 IFIH1Q9BYX4 1025 aaKnown RBP7.81□□□□□ -1.16
SPG11-224ENST00000561268 GRPEL1Q9HAV7 217 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 NCOA5Q9HCD5 579 aaKnown RBP7.81□□□□□ -1.16
SPG11-224ENST00000561268 LMCD1Q9NZU5 365 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 XIRP2A4UGR9 3374 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 MTCL1Q9Y4B5 1905 aaKnown RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 CYP3A7-CYP3A51PA0A087WV96 503 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 KIF28PB7ZC32 967 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 RBAK-RBAKDNI3L0D1 243 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 IPO5O00410 1097 aaKnown RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 DEXIO95424 95 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 INSRRP14616 1297 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 ATP4AP20648 1035 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 CYP3A7P24462 503 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 MARK3P27448 753 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 CHMP4BP1P59074 171 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 MRPS6P82932 125 aaKnown RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 CCDC173Q0VFZ6 552 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 GRB10Q13322 594 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 ARSIQ5FYB1 569 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 TJAP1Q5JTD0 557 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 JAKMIP3Q5VZ66 844 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.8□□□□□ -1.161e-8■■■■■ 35.1
SPG11-224ENST00000561268 TSHZ1Q6ZSZ6 1077 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 TMCO2Q7Z6W1 182 aaPredicted RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 PLA2G4DQ86XP0 818 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 SMAP1Q8IYB5 467 aaPredicted RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 BICD2Q8TD16 824 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 RASGRP4Q8TDF6 673 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 SAMD11Q96NU1 681 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 TGS1Q96RS0 853 aaKnown RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 PPP1R9BQ96SB3 815 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 C6orf50Q9HD87 102 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 PRDM6Q9NQX0 595 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 VPS54Q9P1Q0 977 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 INSL6Q9Y581 213 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 PCDHA2Q9Y5H9 948 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 MAFBQ9Y5Q3 323 aaPredicted RBP7.8□□□□□ -1.16
SPG11-224ENST00000561268 CYP46A1Q9Y6A2 500 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 CDY2AQ9Y6F7 541 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 C2orf16Q68DN1 1984 aa7.8□□□□□ -1.16
SPG11-224ENST00000561268 ADGRA3Q8IWK6 1321 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 C5orf67F2Z3F1 127 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 HBP1O60381 514 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 PSMD10O75832 226 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 C22orf31O95567 290 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 AMHP03971 560 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 HSP90AA1P07900 732 aaKnown RBP7.79□□□□□ -1.16
SPG11-224ENST00000561268 GHRP10912 638 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 STAT5BP51692 787 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 USP11P51784 963 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 FGD1P98174 961 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 KRT76Q01546 638 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 GALNT17Q6IS24 598 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 IFNLR1Q8IU57 520 aaPredicted RBP7.79□□□□□ -1.16
SPG11-224ENST00000561268 RDM1Q8NG50 284 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 ETNPPLQ8TBG4 499 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 GDPD5Q8WTR4 605 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 DNAJB3Q8WWF6 145 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 GLG1Q92896 1179 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 SLC5A5Q92911 643 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 CLP1Q92989 425 aaKnown RBP7.79□□□□□ -1.16
SPG11-224ENST00000561268 ZNF689Q96CS4 500 aaPredicted RBP7.79□□□□□ -1.16
SPG11-224ENST00000561268 RIT2Q99578 217 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 SLC26A6Q9BXS9 759 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 UPF3BQ9BZI7 483 aaKnown RBP7.79□□□□□ -1.16
SPG11-224ENST00000561268 AZI2Q9H6S1 392 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 AGO3Q9H9G7 860 aaKnown RBP7.79□□□□□ -1.16
SPG11-224ENST00000561268 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 TBC1D22BQ9NU19 505 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 PCDHA4Q9UN74 947 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 TRPV2Q9Y5S1 764 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 CITO14578 2027 aa7.79□□□□□ -1.16
SPG11-224ENST00000561268 ZNF318Q5VUA4 2279 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 ZNF862O60290 1169 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms