RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 MBTPS1Q14703 1052 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 GRIN2CQ14957 1233 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 RAB30Q15771 203 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 FERMT3Q86UX7 667 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 SLC17A8Q8NDX2 589 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 LXNQ9BS40 222 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 MSRAQ9UJ68 235 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 CEP131Q9UPN4 1083 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 KAT6AQ92794 2004 aa17.4■□□□□ 0.38
RABGGTA-219ENST00000560871 SMIM35A0A1B0GVV1 85 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 ZBBXA8MT70 800 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 LAD1O00515 517 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 STX6O43752 255 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 FXR2P51116 673 aaKnown RBP eCLIP17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 MGAT3Q09327 533 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 PTGDRQ13258 359 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 NEK9Q8TD19 979 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 DYDC2Q96IM9 177 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 CEP89Q96ST8 783 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 HSD17B14Q9BPX1 270 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 NIFKQ9BYG3 293 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 RGL1Q9NZL6 768 aa17.39■□□□□ 0.37
RABGGTA-219ENST00000560871 TMEM150BA6NC51 233 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 RBAK-RBAKDNI3L0D1 243 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 NBNO60934 754 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 CXCL10P02778 98 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 CTSHP09668 335 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 KLRC1P26715 233 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 PRPHP41219 470 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 TECP42680 631 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 ATP2C1P98194 919 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 CYP4A11Q02928 519 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 FAM26DQ5JW98 314 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 ANO5Q75V66 913 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 TRMT1LQ7Z2T5 733 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 LINC01465Q8N7H1 131 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 DNAJB3Q8WWF6 145 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 NKX2-4Q9H2Z4 354 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 NRBP2Q9NSY0 501 aa17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 YBX2Q9Y2T7 364 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 MYH9P35579 1960 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-219ENST00000560871 COL6A3P12111 3177 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 RSPH10B2B2RC85 870 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 DKC1O60832 514 aaKnown RBP eCLIP17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 SLITRK3O94933 977 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 LYPLA2O95372 231 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 RPLP2P05387 115 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 RSPH10BP0C881 870 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 RABGGTBP53611 331 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 CTTNQ14247 550 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 IL17AQ16552 155 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 IGSF22Q8N9C0 903 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 PHOSPHO2Q8TCD6 241 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 FAM49AQ9H0Q0 323 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 ZSWIM4Q9H7M6 989 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 PCDHA11Q9Y5I1 949 aa17.37■□□□□ 0.37
RABGGTA-219ENST00000560871 ARID2Q68CP9 1835 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 BAIAP3O94812 1187 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 FOSL2P15408 326 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 MTERF2Q49AM1 385 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 PLA2G4FQ68DD2 849 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 SLC9A7Q96T83 725 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 OSBPL7Q9BZF2 842 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 SLC28A3Q9HAS3 691 aa17.36■□□□□ 0.37
RABGGTA-219ENST00000560871 IGKV6-21A0A0C4DH24 114 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 MED24O75448 989 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 CHRNA1P02708 482 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 SPATA31C1P0DKV0 1188 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 MYOGP15173 224 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 YWHABP31946 246 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 TMEM266Q2M3C6 531 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 TCTN1Q2MV58 587 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 FAM173BQ6P4H8 233 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 CNKSR3Q6P9H4 555 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 RSPH3Q86UC2 560 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 KIAA0319LQ8IZA0 1049 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 SPRYD3Q8NCJ5 442 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 MAFAQ8NHW3 353 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 CDY2AQ9Y6F7 541 aa17.35■□□□□ 0.37
RABGGTA-219ENST00000560871 MAGEB2O15479 319 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 CLCN3P51790 818 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 MRPS6P82932 125 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 PKP1Q13835 747 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 LRRC71Q8N4P6 559 aa17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 ZSCAN16Q9H4T2 348 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-219ENST00000560871 TUFT1Q9NNX1 390 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms