RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
TPM1-219ENST00000559397 GRB10Q13322 594 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 KCNA10Q16322 511 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 FAM160B1Q5W0V3 765 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 ISM2Q6H9L7 571 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 TPH2Q8IWU9 490 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 SMARCAD1Q9H4L7 1026 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 KDM3AQ9Y4C1 1321 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 ZEB2O60315 1214 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 KPNA6O60684 536 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 STBD1O95210 358 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 LYPLA2O95372 231 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 F2P00734 622 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 MYL3P08590 195 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 TMEM119Q4V9L6 283 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 C4orf19Q8IY42 314 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 MLKLQ8NB16 471 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 ARRDC4Q8NCT1 418 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 RASSF8Q8NHQ8 419 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 KAT2BQ92831 832 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 GLG1Q92896 1179 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 ATP6V0A1Q93050 837 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 CALML4Q96GE6 196 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 AZI2Q9H6S1 392 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
TPM1-219ENST00000559397 CASP1P29466 404 aa18.42■□□□□ 0.54
TPM1-219ENST00000559397 POTEGQ6S5H5 508 aa18.42■□□□□ 0.54
TPM1-219ENST00000559397 AOPEPQ8N6M6 819 aa18.42■□□□□ 0.54
TPM1-219ENST00000559397 U2AF1L4Q8WU68 220 aaKnown RBP18.42■□□□□ 0.54
TPM1-219ENST00000559397 STAMQ92783 540 aa18.42■□□□□ 0.54
TPM1-219ENST00000559397 ERAP1Q9NZ08 941 aa18.42■□□□□ 0.54
TPM1-219ENST00000559397 KIAA1024Q9UPX6 916 aa18.42■□□□□ 0.54
TPM1-219ENST00000559397 BECN2A8MW95 431 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 GOLGA6L19H0YKK7 550 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 H3BRB1 525 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 IKBKBO14920 756 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 DKC1O60832 514 aaKnown RBP eCLIP18.41■□□□□ 0.54
TPM1-219ENST00000559397 ADCY5O95622 1261 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 ASGR1P07306 291 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 GJA8P48165 433 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 SLC26A2P50443 739 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 CUL4BQ13620 913 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 NCAPHQ15003 741 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 CT47A1Q5JQC4 288 aaPredicted RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 PCSK9Q8NBP7 692 aaKnown RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 PLIN2Q99541 437 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 TSEN34Q9BSV6 310 aaKnown RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 NT5C3AQ9H0P0 336 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 TUT1Q9H6E5 874 aaKnown RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 STK17AQ9UEE5 414 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 HAS3O00219 553 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 DNM1LO00429 736 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 PSMC6P62333 389 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 PRKCEQ02156 737 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 PLCB4Q15147 1175 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 COL13A1Q5TAT6 717 aaPredicted RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 SARM1Q6SZW1 724 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 CXCL17Q6UXB2 119 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 KCNK18Q7Z418 384 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 KCTD17Q8N5Z5 321 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 MTG1Q9BT17 334 aaPredicted RBP18.41■□□□□ 0.54
TPM1-219ENST00000559397 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
TPM1-219ENST00000559397 SCN10AQ9Y5Y9 1956 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 MOXD2PA6NHM9 499 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 ZBTB39O15060 712 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 MARK3P27448 753 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 MNX1P50219 401 aaPredicted RBP18.4■□□□□ 0.54
TPM1-219ENST00000559397 ACLYP53396 1101 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 BLZF1Q9H2G9 400 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 RNPEPQ9H4A4 650 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 DACH1Q9UI36 760 aa18.4■□□□□ 0.54
TPM1-219ENST00000559397 ZNF215Q9UL58 517 aaPredicted RBP18.4■□□□□ 0.54
TPM1-219ENST00000559397 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 OATP04181 439 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 YWHABP31946 246 aaKnown RBP18.39■□□□□ 0.53
TPM1-219ENST00000559397 PSEN2P49810 448 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 XKR3Q5GH77 459 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 ANO5Q75V66 913 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 PIGOQ8TEQ8 1089 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 ATP8B4Q8TF62 1192 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 NACC1Q96RE7 527 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 C7orf25Q9BPX7 421 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 PHF24Q9UPV7 400 aa18.39■□□□□ 0.53
TPM1-219ENST00000559397 TMEM150BA6NC51 233 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 E9PMD0 336 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 TFRCP02786 760 aaKnown RBP18.38■□□□□ 0.53
TPM1-219ENST00000559397 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
TPM1-219ENST00000559397 KCNB1Q14721 858 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 MFSD10Q14728 455 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
TPM1-219ENST00000559397 FAM167AQ96KS9 214 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 TMEM106CQ9BVX2 250 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 KATNAL1Q9BW62 490 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 NIFKQ9BYG3 293 aaKnown RBP18.38■□□□□ 0.53
TPM1-219ENST00000559397 RMND1Q9NWS8 449 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 DNM3Q9UQ16 869 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms