RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 C16orf45Q96MC5 204 aaPredicted RBP21.74■■□□□ 1.07
SSH1-209ENST00000551165 MMP19Q99542 508 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 ODF2LQ9ULJ1 636 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 MYH11P35749 1972 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 TGFB1I1O43294 461 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 VWA3BQ502W6 1294 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 XKR9Q5GH70 373 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 FAM178BQ8IXR5 827 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 C2orf69Q8N8R5 385 aa21.74■■□□□ 1.07
SSH1-209ENST00000551165 SMCR8Q8TEV9 937 aaPredicted RBP21.74■■□□□ 1.07
SSH1-209ENST00000551165 DNAJC25-GNG10A0A024R161 153 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 CLIC2O15247 247 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 CETPP11597 493 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 UBA1P22314 1058 aaKnown RBP21.73■■□□□ 1.07
SSH1-209ENST00000551165 NR2F2P24468 414 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 MTF1Q14872 753 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 DNTTIP2Q5QJE6 756 aaKnown RBP21.73■■□□□ 1.07
SSH1-209ENST00000551165 SMAP1Q8IYB5 467 aaPredicted RBP21.73■■□□□ 1.07
SSH1-209ENST00000551165 PTPN18Q99952 460 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 NDST4Q9H3R1 872 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 TRAF3IP3Q9Y228 551 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 LOXHD1Q8IVV2 1947 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 A0A1W2PQC6 194 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 TTC26A0AVF1 554 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 KIF20AO95235 890 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 FGFR1OPO95684 399 aaKnown RBP21.73■■□□□ 1.07
SSH1-209ENST00000551165 SOX10P56693 466 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 ZC3H3Q8IXZ2 948 aaKnown RBP21.73■■□□□ 1.07
SSH1-209ENST00000551165 CCDC112Q8NEF3 446 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 RDM1Q8NG50 284 aa21.73■■□□□ 1.07
SSH1-209ENST00000551165 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.73■■□□□ 1.07
SSH1-209ENST00000551165 LRRC37A2A6NM11 1700 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 PSAPP07602 524 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 GTF2A2P52657 109 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 KCTD2Q14681 263 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 MAN2A1Q16706 1144 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 CCDC40Q4G0X9 1142 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 SPRYD7Q5W111 196 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 UNCXA6NJT0 531 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 ARIH2O95376 493 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 FKBP1BP68106 108 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 LY6KQ17RY6 165 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 EDRF1Q3B7T1 1238 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 TMEM63BQ5T3F8 832 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 CEP63Q96MT8 703 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 PANX2Q96RD6 677 aa21.72■■□□□ 1.07
SSH1-209ENST00000551165 ZNFX1Q9P2E3 1918 aaKnown RBP21.71■■□□□ 1.07
SSH1-209ENST00000551165 SYNGAP1Q96PV0 1343 aa21.71■■□□□ 1.07
SSH1-209ENST00000551165 SOWAHDA6NJG2 315 aa21.71■■□□□ 1.07
SSH1-209ENST00000551165 ITGBL1O95965 494 aaPredicted RBP21.71■■□□□ 1.07
SSH1-209ENST00000551165 CCDC43Q96MW1 224 aaKnown RBP21.71■■□□□ 1.07
SSH1-209ENST00000551165 PNMA3Q9UL41 463 aa21.71■■□□□ 1.07
SSH1-209ENST00000551165 MCM3APO60318 1980 aa21.71■■□□□ 1.07
SSH1-209ENST00000551165 PDXKO00764 312 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 SUPT20HL2P0C7V6 817 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 ATP4AP20648 1035 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 CASP4P49662 377 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 TOGARAM2Q6ZUX3 1019 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 MROH8Q9H579 483 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 ANKEF1Q9NU02 776 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 AGPAT5Q9NUQ2 364 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 TYW1Q9NV66 732 aaKnown RBP21.7■■□□□ 1.07
SSH1-209ENST00000551165 SEL1LQ9UBV2 794 aa21.7■■□□□ 1.07
SSH1-209ENST00000551165 EPHB6O15197 1021 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 TPM2P07951 284 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 KRT9P35527 623 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 PRKCEQ02156 737 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.7■■□□□ 1.06
SSH1-209ENST00000551165 GPRC5AQ8NFJ5 357 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 STRA6Q9BX79 667 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 ABHD10Q9NUJ1 306 aa21.7■■□□□ 1.06
SSH1-209ENST00000551165 EIF3DO15371 548 aaKnown RBP eCLIP21.69■■□□□ 1.06
SSH1-209ENST00000551165 STX10O60499 249 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 AKAP3O75969 853 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 FARP2O94887 1054 aaPredicted RBP21.69■■□□□ 1.06
SSH1-209ENST00000551165 NR3C1P04150 777 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 RAD9BQ6WBX8 426 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.69■■□□□ 1.06
SSH1-209ENST00000551165 PPP4R3CPQ6ZMV5 832 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 ATP6V0A1Q93050 837 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 CEP170P1Q96L14 293 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 TTYH3Q9C0H2 523 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 CETN3O15182 167 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 PPP1R37O75864 691 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 FAM102BQ5T8I3 360 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 MIS18BP1Q6P0N0 1132 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 TRIM59Q8IWR1 403 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 FBXO16Q8IX29 292 aaPredicted RBP21.69■■□□□ 1.06
SSH1-209ENST00000551165 PPP1R13BQ96KQ4 1090 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 ERGIC2Q96RQ1 377 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 DESI2Q9BSY9 194 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 SIK3Q9Y2K2 1263 aa21.69■■□□□ 1.06
SSH1-209ENST00000551165 R3HCC1Q9Y3T6 440 aaKnown RBP21.69■■□□□ 1.06
SSH1-209ENST00000551165 PCNTO95613 3336 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 GSTTP1A0A1W2PQM5 241 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 TISP43B9A030 160 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 ARHGAP6O43182 974 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 NRDCO43847 1150 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 ATG7O95352 703 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 FKBP15Q5T1M5 1219 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms