RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 LPIN1Q14693 890 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 FBXO47Q5MNV8 452 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 TSHZ1Q6ZSZ6 1077 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 TRMT1LQ7Z2T5 733 aaKnown RBP19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 OSBPL7Q9BZF2 842 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
CHMP1A-208ENST00000550102 NLRC5Q86WI3 1866 aa19.39■□□□□ 0.7
CHMP1A-208ENST00000550102 TLL1O43897 1013 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 NEMFO60524 1076 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 CA3P07451 260 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 MYOGP15173 224 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 MCM2P49736 904 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 TMEM62Q0P6H9 643 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 NME8Q8N427 588 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 FBXO18Q8NFZ0 1043 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 MYLIPQ8WY64 445 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 ZBED2Q9BTP6 218 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 NRBP2Q9NSY0 501 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 COL4A6Q14031 1691 aa19.39■□□□□ 0.69
CHMP1A-208ENST00000550102 MAGEB2O15479 319 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 BAG4O95429 457 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 FOSL2P15408 326 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 GNL2Q13823 731 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 HAS1Q92839 578 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 TMX3Q96JJ7 454 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 CELF4Q9BZC1 486 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 FOXP1Q9H334 677 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 SEPT9Q9UHD8 586 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 KDM3AQ9Y4C1 1321 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 SQORQ9Y6N5 450 aa19.38■□□□□ 0.69
CHMP1A-208ENST00000550102 TTC3P53804 2025 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 RALGAPA2Q2PPJ7 1873 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 RBAK-RBAKDNI3L0D1 243 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 GJB5O95377 273 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 CD2BP2O95400 341 aaKnown RBP19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 CALCRLQ16602 461 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 XKR3Q5GH77 459 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.37■□□□□ 0.691e-10■■□□□ 13.8
CHMP1A-208ENST00000550102 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 KIAA0319LQ8IZA0 1049 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 MYOCDQ8IZQ8 938 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 METTL13Q8N6R0 699 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 BANK1Q8NDB2 785 aa19.37■□□□□ 0.69
CHMP1A-208ENST00000550102 EML1O00423 815 aa19.36■□□□□ 0.69
CHMP1A-208ENST00000550102 PSMC5P62195 406 aa19.36■□□□□ 0.69
CHMP1A-208ENST00000550102 TBC1D8BQ0IIM8 1120 aa19.36■□□□□ 0.69
CHMP1A-208ENST00000550102 PAK2Q13177 524 aa19.36■□□□□ 0.69
CHMP1A-208ENST00000550102 MAP7D2Q96T17 732 aa19.36■□□□□ 0.69
CHMP1A-208ENST00000550102 PRDM12Q9H4Q4 367 aa19.36■□□□□ 0.69
CHMP1A-208ENST00000550102 WNT7AO00755 349 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 DKC1O60832 514 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 TMOD1P28289 359 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 CD52P31358 61 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 QARSP47897 775 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 CLCN3P51790 818 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 SPIRE1Q08AE8 756 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 NCAPH2Q6IBW4 605 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 FAM117BQ6P1L5 589 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 NOSTRINQ8IVI9 506 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 GAS2L1Q99501 681 aaPredicted RBP19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 RAD9AQ99638 391 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 BACH2Q9BYV9 841 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 AGO3Q9H9G7 860 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 GINS2Q9Y248 185 aa19.35■□□□□ 0.69
CHMP1A-208ENST00000550102 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 ORC2Q13416 577 aaPredicted RBP19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 MTERF2Q49AM1 385 aa19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 EFCAB12Q6NXP0 572 aa19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 LINC01465Q8N7H1 131 aa19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 LXNQ9BS40 222 aa19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 NIFKQ9BYG3 293 aaKnown RBP19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 AKT3Q9Y243 479 aa19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 GTF3C3Q9Y5Q9 886 aa19.34■□□□□ 0.69
CHMP1A-208ENST00000550102 LCHNA4D1U4 455 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 VTNP04004 478 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 P4HBP07237 508 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 ATP2B1P20020 1258 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 MCM7P33993 719 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 TAP1Q03518 808 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 EPHA7Q15375 998 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 TARBP2Q15633 366 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 KIZQ2M2Z5 673 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 ZNF710Q8N1W2 664 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 LRRC71Q8N4P6 559 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 MAFAQ8NHW3 353 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 PPP1R16BQ96T49 567 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 FTHL17Q9BXU8 183 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 TTC12Q9H892 705 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 PADI3Q9ULW8 664 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 NOL7Q9UMY1 257 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 PCDHA12Q9UN75 941 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 INSL6Q9Y581 213 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 EYSQ5T1H1 3165 aa19.33■□□□□ 0.68
CHMP1A-208ENST00000550102 KIAA1671Q9BY89 1806 aa19.32■□□□□ 0.68
CHMP1A-208ENST00000550102 TMEM150BA6NC51 233 aa19.32■□□□□ 0.68
CHMP1A-208ENST00000550102 DDX11L8A8MPP1 907 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms