RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TECP42680 631 aa21.45■■□□□ 1.02
DDX55-211ENST00000544429 PDIA5Q14554 519 aa21.45■■□□□ 1.02
DDX55-211ENST00000544429 DNAJB3Q8WWF6 145 aa21.45■■□□□ 1.02
DDX55-211ENST00000544429 ZSWIM4Q9H7M6 989 aa21.45■■□□□ 1.02
DDX55-211ENST00000544429 IGKV6-21A0A0C4DH24 114 aa21.44■■□□□ 1.02
DDX55-211ENST00000544429 TMEM150BA6NC51 233 aa21.44■■□□□ 1.02
DDX55-211ENST00000544429 CHRNA1P02708 482 aa21.44■■□□□ 1.02
DDX55-211ENST00000544429 ACRP10323 421 aa21.44■■□□□ 1.02
DDX55-211ENST00000544429 CYP4A11Q02928 519 aa21.44■■□□□ 1.02
DDX55-211ENST00000544429 ARL6IP4Q66PJ3 421 aaKnown RBP21.44■■□□□ 1.02
DDX55-211ENST00000544429 PSRC1Q6PGN9 363 aaPredicted RBP21.44■■□□□ 1.02
DDX55-211ENST00000544429 RPUSD2Q8IZ73 545 aaKnown RBP21.44■■□□□ 1.02
DDX55-211ENST00000544429 KIAA0319LQ8IZA0 1049 aa21.44■■□□□ 1.02
DDX55-211ENST00000544429 POLR3CQ9BUI4 534 aaPredicted RBP21.44■■□□□ 1.02
DDX55-211ENST00000544429 ZSCAN16Q9H4T2 348 aaPredicted RBP21.44■■□□□ 1.02
DDX55-211ENST00000544429 RSPH10B2B2RC85 870 aa21.43■■□□□ 1.02
DDX55-211ENST00000544429 MAGEB2O15479 319 aa21.43■■□□□ 1.02
DDX55-211ENST00000544429 HSP90AA1P07900 732 aaKnown RBP21.43■■□□□ 1.02
DDX55-211ENST00000544429 RSPH10BP0C881 870 aa21.43■■□□□ 1.02
DDX55-211ENST00000544429 CTTNQ14247 550 aaKnown RBP21.43■■□□□ 1.02
DDX55-211ENST00000544429 HABP4Q5JVS0 413 aaKnown RBP21.43■■□□□ 1.02
DDX55-211ENST00000544429 ZNF365Q70YC5 407 aa21.43■■□□□ 1.02
DDX55-211ENST00000544429 TRMT1LQ7Z2T5 733 aaKnown RBP21.43■■□□□ 1.02
DDX55-211ENST00000544429 OSBPL7Q9BZF2 842 aa21.43■■□□□ 1.02
DDX55-211ENST00000544429 RPA1P27694 616 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 YWHABP31946 246 aaKnown RBP21.42■■□□□ 1.02
DDX55-211ENST00000544429 LRIT3Q3SXY7 679 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 RSPH3Q86UC2 560 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 CATSPER3Q86XQ3 398 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 NME8Q8N427 588 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 HERVK_113Q902F9 699 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 TUFT1Q9NNX1 390 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 SEPT9Q9UHD8 586 aaPredicted RBP21.42■■□□□ 1.02
DDX55-211ENST00000544429 KDM3AQ9Y4C1 1321 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 PPME1Q9Y570 386 aa21.42■■□□□ 1.02
DDX55-211ENST00000544429 MORC2Q9Y6X9 1032 aaPredicted RBP21.42■■□□□ 1.02
DDX55-211ENST00000544429 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 MED24O75448 989 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 BMP15O95972 392 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 MUTP22033 750 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 MRPS6P82932 125 aaKnown RBP21.41■■□□□ 1.02
DDX55-211ENST00000544429 MKRN4PQ13434 485 aaPredicted RBP21.41■■□□□ 1.02
DDX55-211ENST00000544429 PTPAQ15257 358 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 TMEM266Q2M3C6 531 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 FAM173BQ6P4H8 233 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 DTHD1Q6ZMT9 781 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 TPH2Q8IWU9 490 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 ZNF579Q8NAF0 562 aaKnown RBP21.41■■□□□ 1.02
DDX55-211ENST00000544429 FAM49AQ9H0Q0 323 aaPredicted RBP21.41■■□□□ 1.02
DDX55-211ENST00000544429 CYP26B1Q9NR63 512 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 MICAL3Q7RTP6 2002 aa21.41■■□□□ 1.02
DDX55-211ENST00000544429 PTPRSQ13332 1948 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 ZBTB39O15060 712 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 MAFO75444 373 aaPredicted RBP21.4■■□□□ 1.02
DDX55-211ENST00000544429 FGBP02675 491 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 CTSHP09668 335 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 XRCC6P12956 609 aaKnown RBP eCLIP21.4■■□□□ 1.028e-8■■■□□ 14.6
DDX55-211ENST00000544429 NPEPPSP55786 919 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 PKP1Q13835 747 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 SF3A1Q15459 793 aaKnown RBP21.4■■□□□ 1.02
DDX55-211ENST00000544429 TCTN1Q2MV58 587 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 MTERF2Q49AM1 385 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 PLEKHG4Q58EX7 1191 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 PLA2G4FQ68DD2 849 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 DEFB128Q7Z7B8 93 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 SH2D3AQ9BRG2 576 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 MMTAG2Q9BU76 263 aaKnown RBP21.4■■□□□ 1.02
DDX55-211ENST00000544429 DHX33Q9H6R0 707 aaKnown RBP21.4■■□□□ 1.02
DDX55-211ENST00000544429 ANKEF1Q9NU02 776 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 LRWD1Q9UFC0 647 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 SQORQ9Y6N5 450 aa21.4■■□□□ 1.02
DDX55-211ENST00000544429 ZSCAN22P10073 491 aaPredicted RBP21.39■■□□□ 1.01
DDX55-211ENST00000544429 TBC1D8BQ0IIM8 1120 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 IER5Q5VY09 327 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 EFCAB12Q6NXP0 572 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 OTUD6AQ7L8S5 288 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 SPRYD3Q8NCJ5 442 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 RAB34Q9BZG1 259 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 FTOQ9C0B1 505 aaKnown RBP eCLIP21.39■■□□□ 1.01
DDX55-211ENST00000544429 CLIC4Q9Y696 253 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 CDY2AQ9Y6F7 541 aa21.39■■□□□ 1.01
DDX55-211ENST00000544429 RBAK-RBAKDNI3L0D1 243 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 RARRES1P49788 294 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 CLCN3P51790 818 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 BECN1Q14457 450 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 ECM1Q16610 540 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 FBXO47Q5MNV8 452 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 HAUS3Q68CZ6 603 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 CNKSR3Q6P9H4 555 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 LRRC71Q8N4P6 559 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 ERMNQ8TAM6 284 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 CELF4Q9BZC1 486 aaKnown RBP21.38■■□□□ 1.01
DDX55-211ENST00000544429 CXXC1Q9P0U4 656 aaPredicted RBP21.38■■□□□ 1.01
DDX55-211ENST00000544429 STK24Q9Y6E0 443 aa21.38■■□□□ 1.01
DDX55-211ENST00000544429 SZT2Q5T011 3432 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 GPR32O75388 356 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 DRP2Q13474 957 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 LPIN1Q14693 890 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 POTEGQ6S5H5 508 aa21.37■■□□□ 1.01
DDX55-211ENST00000544429 OTOP2Q7RTS6 562 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms