RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 ATP8B4Q8TF62 1192 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 KCNB2Q92953 911 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 CLP1Q92989 425 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 PABPC5Q96DU9 382 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 CELF4Q9BZC1 486 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 ZMYND12Q9H0C1 365 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 TBC1D22BQ9NU19 505 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 TMEM260Q9NX78 707 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 COL1A2P08123 1366 aa12.13□□□□□ -0.47
PTP4A2-216ENST00000534796 IGSF9BQ9UPX0 1349 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 DGKIO75912 1065 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 REC8O95072 547 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 PSMA5P28066 241 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 HSPA4P34932 840 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 TCEAL5Q5H9L2 206 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 ZNF484Q5JVG2 852 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 JAKMIP3Q5VZ66 844 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 MTHFD1LQ6UB35 978 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 Q6ZUG5 572 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 SMAP1Q8IYB5 467 aaPredicted RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 CMTR2Q8IYT2 770 aaKnown RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 CCDC148Q8NFR7 591 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 BRF1Q92994 677 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 ZNF689Q96CS4 500 aaPredicted RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 JAKMIP1Q96N16 626 aaKnown RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 AGO3Q9H9G7 860 aaKnown RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 RC3H2Q9HBD1 1191 aaKnown RBP12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 PADI3Q9ULW8 664 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 NID2Q14112 1375 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 DOCK5Q9H7D0 1870 aa12.12□□□□□ -0.47
PTP4A2-216ENST00000534796 KAT6AQ92794 2004 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 REV3LO60673 3130 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 FAM86B1E9PN63 330 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 DDX39AO00148 427 aaKnown RBP12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 CCNE2O96020 404 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 FAM86B2P0C5J1 330 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 KLRC1P26715 233 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 APOBRQ0VD83 1088 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 PTCRAQ6ISU1 281 aaPredicted RBP12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 CRYGNQ8WXF5 182 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 P2RX5Q93086 422 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 CEP131Q9UPN4 1083 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
PTP4A2-216ENST00000534796 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 GPR182O15218 404 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 MMP1P03956 469 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 PSAPP07602 524 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 EP400NLQ6ZTU2 488 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 CCDC60Q8IWA6 550 aaPredicted RBP12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 CKAP2LQ8IYA6 745 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 GJD3Q8N144 294 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 TRAPPC12Q8WVT3 735 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 FAM167AQ96KS9 214 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 C1orf112Q9NSG2 853 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 PCDHA10Q9Y5I2 948 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 SNX14Q9Y5W7 946 aa12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 TCF20Q9UGU0 1960 aaKnown RBP12.1□□□□□ -0.47
PTP4A2-216ENST00000534796 H3BQ06 376 aaPredicted RBP12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 GRM6O15303 877 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 RPS6KA5O75582 802 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 SSTR3P32745 418 aaPredicted RBP12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 CIITAP33076 1130 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 NFX1Q12986 1120 aaKnown RBP12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 PKN1Q16512 942 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 PRR16Q569H4 304 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 RTN4RL1Q86UN2 441 aaPredicted RBP12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 KIAA0319LQ8IZA0 1049 aa12.09□□□□□ -0.47
PTP4A2-216ENST00000534796 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms