RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SELPP16109 830 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 KLRC1P26715 233 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 CDC25AP30304 524 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 FXR2P51116 673 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS11-205ENST00000534551 DRP2Q13474 957 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 ECM1Q16610 540 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 C16orf59Q7L2K0 433 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 ZNF668Q96K58 619 aaPredicted RBP15.72■□□□□ 0.11
VPS11-205ENST00000534551 CEP89Q96ST8 783 aa15.72■□□□□ 0.11
VPS11-205ENST00000534551 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS11-205ENST00000534551 VWA3AA6NCI4 1184 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 RRN3P2A6NIE6 340 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 DDX11L8A8MPP1 907 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 SLITRK3O94933 977 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 F13A1P00488 732 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 SPATA31C1P0DKV0 1188 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 ZSCAN22P10073 491 aaPredicted RBP15.71■□□□□ 0.11
VPS11-205ENST00000534551 MGAT3Q09327 533 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 BECN1Q14457 450 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 PTPAQ15257 358 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 SHHQ15465 462 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 TARBP2Q15633 366 aaKnown RBP15.71■□□□□ 0.11
VPS11-205ENST00000534551 TMEM266Q2M3C6 531 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 ZNF484Q5JVG2 852 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 TMEM199Q8N511 208 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 HSD17B14Q9BPX1 270 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 ZDHHC9Q9Y397 364 aa15.71■□□□□ 0.11
VPS11-205ENST00000534551 MYH11P35749 1972 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 CHRNA1P02708 482 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 VTNP04004 478 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 YWHABP31946 246 aaKnown RBP15.7■□□□□ 0.1
VPS11-205ENST00000534551 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.1
VPS11-205ENST00000534551 XKR3Q5GH77 459 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 TAF2Q6P1X5 1199 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 CATSPER3Q86XQ3 398 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 C4orf19Q8IY42 314 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 METTL13Q8N6R0 699 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 NEK9Q8TD19 979 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
VPS11-205ENST00000534551 IL23AQ9NPF7 189 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 PCDHA2Q9Y5H9 948 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 CDY2AQ9Y6F7 541 aa15.7■□□□□ 0.1
VPS11-205ENST00000534551 RSPH10B2B2RC85 870 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 LAD1O00515 517 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 RSPH10BP0C881 870 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 MARCKSP29966 332 aaPredicted RBP15.69■□□□□ 0.1
VPS11-205ENST00000534551 BMP8BP34820 402 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 PRPHP41219 470 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 MRPS6P82932 125 aaKnown RBP15.69■□□□□ 0.1
VPS11-205ENST00000534551 TBC1D8BQ0IIM8 1120 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 TMEM240Q5SV17 173 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 DTHD1Q6ZMT9 781 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 ZNF365Q70YC5 407 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 LINC01465Q8N7H1 131 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 IGSF22Q8N9C0 903 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 NIFKQ9BYG3 293 aaKnown RBP15.69■□□□□ 0.1
VPS11-205ENST00000534551 ZSWIM4Q9H7M6 989 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 CYP26B1Q9NR63 512 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 NRBP2Q9NSY0 501 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 CXXC1Q9P0U4 656 aaPredicted RBP15.69■□□□□ 0.1
VPS11-205ENST00000534551 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
VPS11-205ENST00000534551 LRWD1Q9UFC0 647 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
VPS11-205ENST00000534551 SMIM35A0A1B0GVV1 85 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 GHRP10912 638 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 CCT6AP40227 531 aaKnown RBP15.68■□□□□ 0.1
VPS11-205ENST00000534551 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
VPS11-205ENST00000534551 ZRSR1Q15695 479 aaKnown RBP15.68■□□□□ 0.1
VPS11-205ENST00000534551 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 SPECC1Q5M775 1068 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 OTOP2Q7RTS6 562 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 TDHQ8IZJ6 230 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 LRRC15Q8TF66 581 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 CEP170P1Q96L14 293 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 RNPC3Q96LT9 517 aaKnown RBP15.68■□□□□ 0.1
VPS11-205ENST00000534551 PLIN2Q99541 437 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
VPS11-205ENST00000534551 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 TFIP11Q9UBB9 837 aaKnown RBP15.68■□□□□ 0.1
VPS11-205ENST00000534551 GINS2Q9Y248 185 aa15.68■□□□□ 0.1
VPS11-205ENST00000534551 BRD1O95696 1058 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 RARRES1P49788 294 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 HAUS3Q68CZ6 603 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 FAM109BQ6ICB4 259 aaPredicted RBP15.67■□□□□ 0.1
VPS11-205ENST00000534551 EFCAB12Q6NXP0 572 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 ERMNQ8TAM6 284 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 TMEM40Q8WWA1 233 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 CDHR5Q9HBB8 845 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 TUFT1Q9NNX1 390 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 FBXO2Q9UK22 296 aaPredicted RBP15.67■□□□□ 0.1
VPS11-205ENST00000534551 AKT3Q9Y243 479 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 TRPV2Q9Y5S1 764 aa15.67■□□□□ 0.1
VPS11-205ENST00000534551 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms