RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 LPIN1Q14693 890 aa18.43■□□□□ 0.54
PABPC1-221ENST00000522720 FBXO47Q5MNV8 452 aa18.43■□□□□ 0.54
PABPC1-221ENST00000522720 APBB2Q92870 758 aa18.43■□□□□ 0.54
PABPC1-221ENST00000522720 GUCD1Q96NT3 240 aa18.43■□□□□ 0.54
PABPC1-221ENST00000522720 IFIH1Q9BYX4 1025 aaKnown RBP18.43■□□□□ 0.54
PABPC1-221ENST00000522720 CELF4Q9BZC1 486 aaKnown RBP18.43■□□□□ 0.54
PABPC1-221ENST00000522720 KIF3AQ9Y496 699 aa18.43■□□□□ 0.54
PABPC1-221ENST00000522720 SQORQ9Y6N5 450 aa18.43■□□□□ 0.54
PABPC1-221ENST00000522720 CHD9Q3L8U1 2897 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 M0QZ92 97 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 NEMFO60524 1076 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 GHRP10912 638 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 MYOGP15173 224 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 PSMC5P62195 406 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 DEFB103AP81534 67 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 SPIRE1Q08AE8 756 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 TMEM62Q0P6H9 643 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 EPHA7Q15375 998 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 TARBP2Q15633 366 aaKnown RBP18.42■□□□□ 0.54
PABPC1-221ENST00000522720 CALCRLQ16602 461 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 XKR3Q5GH77 459 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 NOSTRINQ8IVI9 506 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 USP38Q8NB14 1042 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 NIFKQ9BYG3 293 aaKnown RBP18.42■□□□□ 0.54
PABPC1-221ENST00000522720 NKX2-4Q9H2Z4 354 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 SLC28A3Q9HAS3 691 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 PCDHA12Q9UN75 941 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 TRPV2Q9Y5S1 764 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 KDM3AQ9Y4C1 1321 aa18.42■□□□□ 0.54
PABPC1-221ENST00000522720 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
PABPC1-221ENST00000522720 P4HBP07237 508 aaKnown RBP18.41■□□□□ 0.54
PABPC1-221ENST00000522720 ATP2B1P20020 1258 aa18.41■□□□□ 0.54
PABPC1-221ENST00000522720 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
PABPC1-221ENST00000522720 QARSP47897 775 aaKnown RBP18.41■□□□□ 0.54
PABPC1-221ENST00000522720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.41■□□□□ 0.54
PABPC1-221ENST00000522720 TSHZ1Q6ZSZ6 1077 aa18.41■□□□□ 0.54
PABPC1-221ENST00000522720 METTL13Q8N6R0 699 aa18.41■□□□□ 0.54
PABPC1-221ENST00000522720 BANK1Q8NDB2 785 aa18.41■□□□□ 0.54
PABPC1-221ENST00000522720 CDX2Q99626 313 aaPredicted RBP18.41■□□□□ 0.54
PABPC1-221ENST00000522720 AGO3Q9H9G7 860 aaKnown RBP18.41■□□□□ 0.54
PABPC1-221ENST00000522720 STXBP5LQ9Y2K9 1186 aa18.41■□□□□ 0.54
PABPC1-221ENST00000522720 CDH23Q9H251 3354 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 DKC1O60832 514 aaKnown RBP eCLIP18.4■□□□□ 0.54
PABPC1-221ENST00000522720 MCM7P33993 719 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 GNL2Q13823 731 aaKnown RBP18.4■□□□□ 0.54
PABPC1-221ENST00000522720 GRIN2CQ14957 1233 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 NCAPH2Q6IBW4 605 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 EFCAB12Q6NXP0 572 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 TMCO2Q7Z6W1 182 aaPredicted RBP18.4■□□□□ 0.54
PABPC1-221ENST00000522720 LINC01465Q8N7H1 131 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 CEP89Q96ST8 783 aa18.4■□□□□ 0.54
PABPC1-221ENST00000522720 TTC12Q9H892 705 aaPredicted RBP18.4■□□□□ 0.54
PABPC1-221ENST00000522720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.39■□□□□ 0.53
PABPC1-221ENST00000522720 DDX11L8A8MPP1 907 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TLL1O43897 1013 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 GJB5O95377 273 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 AMHP03971 560 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TMOD1P28289 359 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 GJB2P29033 226 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TXKP42681 527 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TRAPPC10P48553 1259 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TBC1D8BQ0IIM8 1120 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 ORC2Q13416 577 aaPredicted RBP18.39■□□□□ 0.53
PABPC1-221ENST00000522720 ZBED2Q9BTP6 218 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TMEM60Q9H2L4 133 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 CDHR5Q9HBB8 845 aa18.39■□□□□ 0.53
PABPC1-221ENST00000522720 SEPT9Q9UHD8 586 aaPredicted RBP18.39■□□□□ 0.53
PABPC1-221ENST00000522720 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.39■□□□□ 0.53
PABPC1-221ENST00000522720 TMEM150BA6NC51 233 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 CA3P07451 260 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 CD52P31358 61 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 CLCN3P51790 818 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 ZNF174Q15697 407 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 MTERF2Q49AM1 385 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 PPP2R2DQ66LE6 453 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 ANO5Q75V66 913 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 C4orf19Q8IY42 314 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 MYOCDQ8IZQ8 938 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 TOP1MTQ969P6 601 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 RAD9AQ99638 391 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 SUGCTQ9HAC7 445 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 RGL1Q9NZL6 768 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 WRAP73Q9P2S5 460 aaPredicted RBP18.38■□□□□ 0.53
PABPC1-221ENST00000522720 PADI3Q9ULW8 664 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 GINS2Q9Y248 185 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 COL6A3P12111 3177 aa18.38■□□□□ 0.53
PABPC1-221ENST00000522720 TTC3P53804 2025 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 ENPP3O14638 875 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 GPR32O75388 356 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 VTNP04004 478 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 CRYBB1P53674 252 aaPredicted RBP18.37■□□□□ 0.53
PABPC1-221ENST00000522720 CUL4AQ13619 759 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 KIZQ2M2Z5 673 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 TTC38Q5R3I4 469 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 FAM43BQ6ZT52 329 aaPredicted RBP18.37■□□□□ 0.53
PABPC1-221ENST00000522720 ZNF710Q8N1W2 664 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 LRRC71Q8N4P6 559 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 DYDC2Q96IM9 177 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms