RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 ORAI3Q9BRQ5 295 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 TEX13AQ9BXU3 409 aaPredicted RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 TRIT1Q9H3H1 467 aaKnown RBP8.68□□□□□ -1.02
RFC1-213ENST00000512275 GPR27Q9NS67 375 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 ZBTB1Q9Y2K1 713 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 SCN7AQ01118 1682 aa8.68□□□□□ -1.02
RFC1-213ENST00000512275 PI4KAP2A4QPH2 592 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 FAM155AB1AL88 458 aaPredicted RBP8.67□□□□□ -1.02
RFC1-213ENST00000512275 ARVCFO00192 962 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 PARNO95453 639 aaKnown RBP8.67□□□□□ -1.02
RFC1-213ENST00000512275 LTBRP36941 435 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 NOP2P46087 812 aaKnown RBP8.67□□□□□ -1.02
RFC1-213ENST00000512275 GPR85P60893 370 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 EEF1DP3Q658K8 133 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 FBXL6Q8N531 539 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 PI4KAP1Q8N8J0 262 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.67□□□□□ -1.02
RFC1-213ENST00000512275 DNAAF4Q8WXU2 420 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 KRTAP9-9Q9BYP9 154 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 KRTAP9-4Q9BYQ2 154 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 CCNL1Q9UK58 526 aaPredicted RBP8.67□□□□□ -1.02
RFC1-213ENST00000512275 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 PCDHA9Q9Y5H5 950 aa8.67□□□□□ -1.02
RFC1-213ENST00000512275 B4E1Z4 1266 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 MEFVO15553 781 aaPredicted RBP8.66□□□□□ -1.02
RFC1-213ENST00000512275 DDX58O95786 925 aaKnown RBP8.66□□□□□ -1.02
RFC1-213ENST00000512275 JMJD7P0C870 316 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 NAT1P18440 290 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 CRKLP46109 303 aaKnown RBP8.66□□□□□ -1.02
RFC1-213ENST00000512275 NEK4P51957 841 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 KCNAB2Q13303 367 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 ZCCHC8Q6NZY4 707 aaKnown RBP8.66□□□□□ -1.02
RFC1-213ENST00000512275 ABHD17CQ6PCB6 329 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 KSR2Q6VAB6 950 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 TTLL7Q6ZT98 887 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 FAM181AQ8N9Y4 354 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 CCDC136Q96JN2 1154 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
RFC1-213ENST00000512275 ATP10DQ9P241 1426 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 WASH4PA8MWX3 477 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 MSCO60682 206 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 KPNA6O60684 536 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 PLS3P13797 630 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 FLT3P36888 993 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 SEPHS1P49903 392 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 CCT4P50991 539 aaKnown RBP8.65□□□□□ -1.02
RFC1-213ENST00000512275 CLCN7P51798 805 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 GUCY1A3Q02108 690 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 NFIAQ12857 509 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 CDCA2Q69YH5 1023 aaPredicted RBP8.65□□□□□ -1.02
RFC1-213ENST00000512275 INTS5Q6P9B9 1019 aaKnown RBP8.65□□□□□ -1.02
RFC1-213ENST00000512275 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 SLC51AQ86UW1 340 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 IFNL3Q8IZI9 196 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 METTL22Q9BUU2 404 aaPredicted RBP8.65□□□□□ -1.02
RFC1-213ENST00000512275 CLEC1BQ9P126 229 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 PLAGL2Q9UPG8 496 aa8.65□□□□□ -1.02
RFC1-213ENST00000512275 COL15A1P39059 1388 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 FGF10O15520 208 aaPredicted RBP8.64□□□□□ -1.03
RFC1-213ENST00000512275 CEACAM5P06731 702 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 SYPP08247 313 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 CPEP16870 476 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 STRN3Q13033 797 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
RFC1-213ENST00000512275 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 ODR4Q5SWX8 454 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 WWC2Q6AWC2 1192 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 LBX2Q6XYB7 198 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 KSR1Q8IVT5 923 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 ATL2Q8NHH9 583 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 MMP19Q99542 508 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 MEIS3Q99687 375 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 MYD88Q99836 296 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 PCDHA8Q9Y5H6 950 aa8.64□□□□□ -1.03
RFC1-213ENST00000512275 EP400Q96L91 3159 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 MYH3P11055 1940 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 GSTM1P09488 218 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 LCP1P13796 627 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 BPIP17213 487 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 IL6STP40189 918 aaPredicted RBP8.63□□□□□ -1.03
RFC1-213ENST00000512275 PCBP3P57721 371 aaKnown RBP8.63□□□□□ -1.03
RFC1-213ENST00000512275 BEND3Q5T5X7 828 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 CDKAL1Q5VV42 579 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 LHFPL2Q6ZUX7 228 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 UBE2R2Q712K3 238 aaPredicted RBP8.63□□□□□ -1.03
RFC1-213ENST00000512275 SMIM5Q71RC9 77 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 NECAB2Q7Z6G3 386 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 MTDHQ86UE4 582 aaKnown RBP8.63□□□□□ -1.03
RFC1-213ENST00000512275 KIF18BQ86Y91 864 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 PLBD2Q8NHP8 589 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 DIO2Q92813 273 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 HSPA12BQ96MM6 686 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 FOXP3Q9BZS1 431 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 SEMA3GQ9NS98 782 aa8.63□□□□□ -1.03
RFC1-213ENST00000512275 ZBTB40Q9NUA8 1239 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms