RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 MAMDC4Q6UXC1 1216 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 ASCL5Q7RTU5 278 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 BMP8AQ7Z5Y6 402 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 RIOX2Q8IUF8 465 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 MSL3Q8N5Y2 521 aaKnown RBP6.48□□□□□ -1.37
PTPN4-210ENST00000485247 TTC16Q8NEE8 873 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 FOXD4L4Q8WXT5 416 aaPredicted RBP6.48□□□□□ -1.37
PTPN4-210ENST00000485247 EDAQ92838 391 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 DDX11Q96FC9 970 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 FTOQ9C0B1 505 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPN4-210ENST00000485247 TUT1Q9H6E5 874 aaKnown RBP6.48□□□□□ -1.37
PTPN4-210ENST00000485247 ALG13Q9NP73 1137 aaKnown RBP6.48□□□□□ -1.37
PTPN4-210ENST00000485247 TLR9Q9NR96 1032 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 TRMT13Q9NUP7 481 aaKnown RBP6.48□□□□□ -1.37
PTPN4-210ENST00000485247 FAM50BQ9Y247 325 aa6.48□□□□□ -1.37
PTPN4-210ENST00000485247 TECTAO75443 2155 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 MED19A0JLT2 244 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 H3BRJ5 948 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 DDX3YO15523 660 aaKnown RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 CABYRO75952 493 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 PTGS1P23219 599 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 SHMT1P34896 483 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 MCAMP43121 646 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 USP5P45974 858 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 DYNLL1P63167 89 aaKnown RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 ARHGAP4P98171 946 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 EHHADHQ08426 723 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 TFCP2Q12800 502 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 PKN1Q16512 942 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 PEAR1Q5VY43 1037 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 B4GALNT3Q6L9W6 998 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 FBXL6Q8N531 539 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 TMEM102Q8N9M5 508 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 PMEPA1Q969W9 287 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 OSMRQ99650 979 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 IRF2BPLQ9H1B7 796 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 ALDH8A1Q9H2A2 487 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-210ENST00000485247 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 FBXO28Q9NVF7 368 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 SOX13Q9UN79 622 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 CACNA1GO43497 2377 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 ASTN1O14525 1302 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 SCN5AQ14524 2016 aa6.47□□□□□ -1.37
PTPN4-210ENST00000485247 COL4A6Q14031 1691 aa6.46□□□□□ -1.37
PTPN4-210ENST00000485247 PRR23AA6NEV1 266 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 IQCF3P0C7M6 154 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 KCNJ6P48051 423 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 PLCD1P51178 756 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 VCPP55072 806 aaKnown RBP6.46□□□□□ -1.38
PTPN4-210ENST00000485247 ERVK-21P61565 698 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 TNFAIP2Q03169 654 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 CLUL1Q15846 466 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 FSCN1Q16658 493 aaKnown RBP6.46□□□□□ -1.38
PTPN4-210ENST00000485247 HGSNATQ68CP4 663 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 PRR23CQ6ZRP0 262 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 KIAA1211Q6ZU35 1233 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 ARMCX2Q7L311 632 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 TTC6Q86TZ1 520 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 KLHL23Q8NBE8 558 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 UBASH3BQ8TF42 649 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 NXPE3Q969Y0 559 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 KLHDC7BQ96G42 594 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 TGS1Q96RS0 853 aaKnown RBP6.46□□□□□ -1.38
PTPN4-210ENST00000485247 FSD1Q9BTV5 496 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 EHD4Q9H223 541 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 ZNF214Q9UL59 606 aaPredicted RBP6.46□□□□□ -1.38
PTPN4-210ENST00000485247 ADAMTS5Q9UNA0 930 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 AKAP2Q9Y2D5 859 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 TNKSO95271 1327 aa6.46□□□□□ -1.38
PTPN4-210ENST00000485247 C5orf42Q9H799 3197 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 DNAJC25-GNG10A0A024R161 153 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 LINC01553A4QN01 128 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 PROB1E7EW31 1015 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 VWA5AO00534 786 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 DYNC1LI2O43237 492 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 ZEB2O60315 1214 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 BAIAP3O94812 1187 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 POLR3DP05423 398 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 SUPT20HL2P0C7V6 817 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 RFC2P35250 354 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 COPB2P35606 906 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 WDR5P61964 334 aaKnown RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 NKX3-2P78367 333 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 DEFB103AP81534 67 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 SMAD2Q15796 467 aaKnown RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 TCEAL5Q5H9L2 206 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 FAM117BQ6P1L5 589 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 ACAD11Q709F0 780 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 TLK2Q86UE8 772 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 GLYCTKQ8IVS8 523 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 CCDC144CPQ8IYA2 1237 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 MIGA1Q8NAN2 632 aa6.45□□□□□ -1.38
PTPN4-210ENST00000485247 PABPC5Q96DU9 382 aaKnown RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 MRPL38Q96DV4 380 aaKnown RBP6.45□□□□□ -1.38
PTPN4-210ENST00000485247 UBL7Q96S82 380 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms