RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 A0A1W2PQ45 241 aaPredicted RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 A0A1W2PQY0 241 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 USP2O75604 605 aaPredicted RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 GNAT1P11488 350 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 PDE6AP16499 860 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 KIR2DL1P43626 348 aaPredicted RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 KIR2DL2P43627 348 aaPredicted RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 OCRLQ01968 901 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 ZP2Q05996 745 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 ATP13A4Q4VNC1 1196 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 ANGEL2Q5VTE6 544 aaKnown RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 C11orf74Q86VG3 221 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 Q8N1Y9 231 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 COG1Q8WTW3 980 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 BCL7CQ8WUZ0 217 aaPredicted RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 CHTF18Q8WVB6 975 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 SMAD5Q99717 465 aaKnown RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 PUS7LQ9H0K6 701 aaKnown RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 ADAMTS10Q9H324 1103 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 ADGRE2Q9UHX3 823 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 SLC5A6Q9Y289 635 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 COA3Q9Y2R0 106 aaPredicted RBP7.03□□□□□ -1.28
UPF3A-205ENST00000479712 RWDD3Q9Y3V2 267 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 KIAA0232Q92628 1395 aa7.03□□□□□ -1.28
UPF3A-205ENST00000479712 A0A0C4DFX4 3053 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 CACNA1AO00555 2505 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 CASP8AP2Q9UKL3 1982 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 CASKIN1Q8WXD9 1431 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 A0A1W2PQ27 194 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 A0A1W2PQ64 194 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 A0A1W2PQC6 194 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 A0A1W2PQD8 194 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 C22orf46C9J442 243 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 FUCA1P04066 466 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 ZGLP1P0C6A0 271 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 ATP2A2P16615 1042 aaKnown RBP7.02□□□□□ -1.29
UPF3A-205ENST00000479712 KRT15P19012 456 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 KPNA1P52294 538 aaPredicted RBP7.02□□□□□ -1.29
UPF3A-205ENST00000479712 CORO7P57737 925 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 RTP1P59025 263 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 LACTBP83111 547 aaPredicted RBP7.02□□□□□ -1.29
UPF3A-205ENST00000479712 SPIRE1Q08AE8 756 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
UPF3A-205ENST00000479712 ARHGAP44Q17R89 818 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 RALGPS1Q5JS13 557 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 PRSS36Q5K4E3 855 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 IQSEC1Q6DN90 963 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 INTS5Q6P9B9 1019 aaKnown RBP7.02□□□□□ -1.29
UPF3A-205ENST00000479712 CEP128Q6ZU80 1094 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 CNTD1Q8N815 330 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 ALPK1Q96QP1 1244 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 EPB41L1Q9H4G0 881 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 EMC7Q9NPA0 242 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 TFCP2L1Q9NZI6 479 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.02□□□□□ -1.29
UPF3A-205ENST00000479712 EBF1Q9UH73 591 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 TCEAL9Q9UHQ7 104 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 TMEM59LQ9UK28 342 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 X6R8D5 127 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 SBNO1A3KN83 1393 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 PLEKHG2Q9H7P9 1386 aa7.02□□□□□ -1.29
UPF3A-205ENST00000479712 NAIPQ13075 1403 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 RGPD8O14715 1765 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-205ENST00000479712 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 PPP1R11O60927 126 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-205ENST00000479712 DGKIO75912 1065 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 CD8BP10966 210 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 EPHB1P54762 984 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 GPR19Q15760 415 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 HSF5Q4G112 596 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-205ENST00000479712 OSTM1Q86WC4 334 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 FMNL3Q8IVF7 1028 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-205ENST00000479712 USP33Q8TEY7 942 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 TRIM8Q9BZR9 551 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 CCDC8Q9H0W5 538 aaPredicted RBP7.01□□□□□ -1.29
UPF3A-205ENST00000479712 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 TAF6LQ9Y6J9 622 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 CRYBG1Q9Y4K1 1723 aa7.01□□□□□ -1.29
UPF3A-205ENST00000479712 AKAP12Q02952 1782 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 SLC12A8A0AV02 714 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 ULK1O75385 1050 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 KRT37O76014 449 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 COL6A2P12110 1019 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 JAM2P57087 298 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 SLC14A2Q15849 920 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 DDB1Q16531 1140 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 MROH9Q5TGP6 573 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 CCDC181Q5TID7 509 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 ZNF574Q6ZN55 896 aaPredicted RBP7□□□□□ -1.29
UPF3A-205ENST00000479712 OTOP1Q7RTM1 612 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 OTOP3Q7RTS5 596 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 RAVER1Q8IY67 606 aaKnown RBP7□□□□□ -1.29
UPF3A-205ENST00000479712 LZTR1Q8N653 840 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 PLEKHO2Q8TD55 490 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 SNX27Q96L92 541 aa7□□□□□ -1.29
UPF3A-205ENST00000479712 MTA3Q9BTC8 594 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms