RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TMEM150BA6NC51 233 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 BMP15O95972 392 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 PFKMP08237 780 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 CTSHP09668 335 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 YWHABP31946 246 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 SHHQ15465 462 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 IL17AQ16552 155 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 MTERF2Q49AM1 385 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 FAM26DQ5JW98 314 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 TMEM240Q5SV17 173 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 FAM173BQ6P4H8 233 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 ZNF365Q70YC5 407 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 OTUD6AQ7L8S5 288 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 NME8Q8N427 588 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 IGSF22Q8N9C0 903 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 VWCEQ96DN2 955 aa16.25■□□□□ 0.19
SQSTM1-205ENST00000464493 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■□□ 15.6
SQSTM1-205ENST00000464493 NBNO60934 754 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 LYPLA2O95372 231 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 FGBP02675 491 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 CHRNA1P02708 482 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 SPATA31C1P0DKV0 1188 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 ZSCAN22P10073 491 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 TBC1D8BQ0IIM8 1120 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 MBTPS1Q14703 1052 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 GPNMBQ14956 572 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 C9orf50Q5SZB4 431 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 IER5Q5VY09 327 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 CATSPER3Q86XQ3 398 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 KIAA0319LQ8IZA0 1049 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 CEP170P1Q96L14 293 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 SH2D3AQ9BRG2 576 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 POLR3CQ9BUI4 534 aaPredicted RBP16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.198e-6■■■□□ 15.4
SQSTM1-205ENST00000464493 TUFT1Q9NNX1 390 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 CYP26B1Q9NR63 512 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
SQSTM1-205ENST00000464493 ZBTB39O15060 712 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 MED24O75448 989 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 CXCL10P02778 98 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.191e-5■■■□□ 14.9
SQSTM1-205ENST00000464493 RPA1P27694 616 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 TMOD1P28289 359 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 NPEPPSP55786 919 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 MRPS6P82932 125 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 TMEM62Q0P6H9 643 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 HAUS3Q68CZ6 603 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 PLA2G4FQ68DD2 849 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 PPME1Q9Y570 386 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 TRIOBPQ9H2D6 2365 aa16.23■□□□□ 0.19
SQSTM1-205ENST00000464493 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 VWA3AA6NCI4 1184 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 M0QZ92 97 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 CCT6AP40227 531 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 MGAT3Q09327 533 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 PKP1Q13835 747 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 HABP4Q5JVS0 413 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 OTOP2Q7RTS6 562 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 NACC1Q96RE7 527 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 ANKEF1Q9NU02 776 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 CDY2AQ9Y6F7 541 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 LAMA3Q16787 3333 aa16.22■□□□□ 0.19
SQSTM1-205ENST00000464493 A0A087WWV3 80 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 MAFO75444 373 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 F13A1P00488 732 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 ACTN1P12814 892 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 MUTP22033 750 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 CDC25AP30304 524 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 DNM2P50570 870 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 CLCN3P51790 818 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 CEBPZQ03701 1054 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 PTPAQ15257 358 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 XKR9Q5GH70 373 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 LINC01465Q8N7H1 131 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 PIGOQ8TEQ8 1089 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 HERVK_113Q902F9 699 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 RNPC3Q96LT9 517 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 JPH2Q9BR39 696 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 CELF4Q9BZC1 486 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 AKT3Q9Y243 479 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 TRPV2Q9Y5S1 764 aa16.21■□□□□ 0.19
SQSTM1-205ENST00000464493 PP2D1A8MPX8 630 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 VTNP04004 478 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms