RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GABBR1Q9UBS5 961 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 LRFN2Q9ULH4 789 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 CEP131Q9UPN4 1083 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 GAS7O60861 476 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 RPS6KA5O75582 802 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 DGKIO75912 1065 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 RB1P06400 928 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 IBSPP21815 317 aaPredicted RBP20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 BMPR1AP36894 532 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 TMEM266Q2M3C6 531 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 NPAS4Q8IUM7 802 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 LINC01599Q8WXQ3 324 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 FAM167AQ96KS9 214 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 PCDHA4Q9UN74 947 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 MAFBQ9Y5Q3 323 aaPredicted RBP20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 TTC3P53804 2025 aa20.87■□□□□ 0.93
AC004540.1-201ENST00000439120 ATP4AP20648 1035 aa20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 KCNA5P22460 613 aa20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 KIAA0319LQ8IZA0 1049 aa20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 TBCKQ8TEA7 893 aa20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 LENG9Q96B70 501 aa20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 NSUN3Q9H649 340 aaKnown RBP20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 RC3H2Q9HBD1 1191 aaKnown RBP20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 MUC3AQ02505 3323 aa20.86■□□□□ 0.93
AC004540.1-201ENST00000439120 EVPLQ92817 2033 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 DENND3A2RUS2 1198 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 C5orf67F2Z3F1 127 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 MSH4O15457 936 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 CHMP2AO43633 222 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 CDKL5O76039 1030 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 C22orf31O95567 290 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 LRCH2Q5VUJ6 765 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 FAM43BQ6ZT52 329 aaPredicted RBP20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 EP400NLQ6ZTU2 488 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 ZNF689Q96CS4 500 aaPredicted RBP20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 PPP1R16BQ96T49 567 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 RIT2Q99578 217 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 TEKT3Q9BXF9 490 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 DISC1Q9NRI5 854 aa20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 RNF216Q9NWF9 866 aaPredicted RBP20.85■□□□□ 0.93
AC004540.1-201ENST00000439120 ZBTB42B2RXF5 422 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 GPR182O15218 404 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 MAGEB2O15479 319 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 SFNP31947 248 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 JAK3P52333 1124 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 KIZQ2M2Z5 673 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 PAN2Q504Q3 1202 aaKnown RBP20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 GALNT17Q6IS24 598 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 RTN4RL1Q86UN2 441 aaPredicted RBP20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 CMTR2Q8IYT2 770 aaKnown RBP20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 FAM177A1Q8N128 213 aaPredicted RBP20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 CLP1Q92989 425 aaKnown RBP20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 MAP7D2Q96T17 732 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 LMAN2LQ9H0V9 348 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 NRBP2Q9NSY0 501 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 NOC2LQ9Y3T9 749 aaKnown RBP20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 PCDHB7Q9Y5E2 793 aa20.84■□□□□ 0.93
AC004540.1-201ENST00000439120 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 VTNP04004 478 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 OATP04181 439 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 TMOD1P28289 359 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 CRYBB1P53674 252 aaPredicted RBP20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 TCEAL5Q5H9L2 206 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 OSMRQ99650 979 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 PLVAPQ9BX97 442 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 TMX1Q9H3N1 280 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 CDHR5Q9HBB8 845 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 ERVK-5Q9HDB9 667 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 AKT3Q9Y243 479 aa20.83■□□□□ 0.93
AC004540.1-201ENST00000439120 CSPG5O95196 566 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 XBP1P17861 261 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 SARSP49591 514 aaKnown RBP20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 PRKCEQ02156 737 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 LEXMQ3ZCV2 418 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 ADAM2Q99965 735 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 SLKQ9H2G2 1235 aaPredicted RBP20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 C1orf112Q9NSG2 853 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 ST3GAL5Q9UNP4 418 aa20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 MRPL42Q9Y6G3 142 aaKnown RBP20.82■□□□□ 0.92
AC004540.1-201ENST00000439120 WDR81Q562E7 1941 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 GRM6O15303 877 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 CLCN3P51790 818 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 NONOQ15233 471 aaKnown RBP eCLIP20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 Q4G0T1 1027 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 EFCAB12Q6NXP0 572 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 MIER3Q7Z3K6 550 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 KRT25Q7Z3Z0 450 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 DAGLBQ8NCG7 672 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 TMEM40Q8WWA1 233 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 SCLT1Q96NL6 688 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 AIFM3Q96NN9 605 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 UNC45AQ9H3U1 944 aa20.81■□□□□ 0.92
AC004540.1-201ENST00000439120 NCK2O43639 380 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 TDP2O95551 362 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 LINC00271P0C7V0 271 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 TBC1D8BQ0IIM8 1120 aa20.8■□□□□ 0.92
AC004540.1-201ENST00000439120 PUS10Q3MIT2 529 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms