RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 CTSHP09668 335 aa24.07■■□□□ 1.44
CPNE1-211ENST00000420363 MTHFD1LQ6UB35 978 aa24.07■■□□□ 1.44
CPNE1-211ENST00000420363 CKAP2LQ8IYA6 745 aa24.07■■□□□ 1.44
CPNE1-211ENST00000420363 SLFN12Q8IYM2 578 aa24.07■■□□□ 1.44
CPNE1-211ENST00000420363 HAS1Q92839 578 aa24.07■■□□□ 1.44
CPNE1-211ENST00000420363 CHD7Q9P2D1 2997 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 PTPRSQ13332 1948 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 OATP04181 439 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 GUCY1B3Q02153 619 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 PRKCEQ02156 737 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 MGAT3Q09327 533 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 ORC2Q13416 577 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-211ENST00000420363 PLEKHG4Q58EX7 1191 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 TRAPPC12Q8WVT3 735 aa24.06■■□□□ 1.44
CPNE1-211ENST00000420363 ABHD14A-ACY1A0A1B0GW23 586 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 ZNF862O60290 1169 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 NEMFO60524 1076 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 BAG4O95429 457 aaKnown RBP24.05■■□□□ 1.44
CPNE1-211ENST00000420363 MRPS6P82932 125 aaKnown RBP24.05■■□□□ 1.44
CPNE1-211ENST00000420363 HERC6Q8IVU3 1022 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 DNAJB3Q8WWF6 145 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 APBB2Q92870 758 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 CERS4Q9HA82 394 aa24.05■■□□□ 1.44
CPNE1-211ENST00000420363 GTPBP6O43824 516 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-211ENST00000420363 C22orf31O95567 290 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 KCNJ6P48051 423 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 TRAPPC10P48553 1259 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 WDR5P61964 334 aaKnown RBP24.04■■□□□ 1.44
CPNE1-211ENST00000420363 MKRN4PQ13434 485 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-211ENST00000420363 UGCGQ16739 394 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 NOSTRINQ8IVI9 506 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 NME8Q8N427 588 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 SQORQ9Y6N5 450 aa24.04■■□□□ 1.44
CPNE1-211ENST00000420363 RFXAPO00287 272 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 MARCH6O60337 910 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 CHRNA1P02708 482 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 U2AF2P26368 475 aaKnown RBP eCLIP24.03■■□□□ 1.443e-26■□□□□ 9.9
CPNE1-211ENST00000420363 SPIRE1Q08AE8 756 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 IKBKEQ14164 716 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 SKIV2LQ15477 1246 aaKnown RBP24.03■■□□□ 1.44
CPNE1-211ENST00000420363 CALCRLQ16602 461 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 IER5Q5VY09 327 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 ADAMTS19Q8TE59 1207 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 SEPT8Q92599 483 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 NRBP2Q9NSY0 501 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-211ENST00000420363 KDM3AQ9Y4C1 1321 aa24.03■■□□□ 1.44
CPNE1-211ENST00000420363 M0QZ92 97 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 MAGEB2O15479 319 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 DKC1O60832 514 aaKnown RBP eCLIP24.02■■□□□ 1.44
CPNE1-211ENST00000420363 KLRC1P26715 233 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 PSMC5P62195 406 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 GNL2Q13823 731 aaKnown RBP24.02■■□□□ 1.44
CPNE1-211ENST00000420363 XKR3Q5GH77 459 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 DBF4BQ8NFT6 615 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 FAM49AQ9H0Q0 323 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-211ENST00000420363 TRPV2Q9Y5S1 764 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 CDY2AQ9Y6F7 541 aa24.02■■□□□ 1.44
CPNE1-211ENST00000420363 EVPLQ92817 2033 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 EML1O00423 815 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 WNT7AO00755 349 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 TLL1O43897 1013 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 GJB2P29033 226 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 TCTN1Q2MV58 587 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 ARNTL2Q8WYA1 636 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 ZBTB10Q96DT7 871 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 MTMR9Q96QG7 549 aa24.01■■□□□ 1.43
CPNE1-211ENST00000420363 P4HBP07237 508 aaKnown RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 POU3F3P20264 500 aaPredicted RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 TAP1Q03518 808 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 CUL4AQ13619 759 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 EPHA7Q15375 998 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 AAK1Q2M2I8 961 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 FBXO47Q5MNV8 452 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 TSHZ1Q6ZSZ6 1077 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 FAM43BQ6ZT52 329 aaPredicted RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 UHRF1Q96T88 793 aaPredicted RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 ZBED2Q9BTP6 218 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 NIFKQ9BYG3 293 aaKnown RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 IFIH1Q9BYX4 1025 aaKnown RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 NOL7Q9UMY1 257 aaKnown RBP24■■□□□ 1.43
CPNE1-211ENST00000420363 SMC3Q9UQE7 1217 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 MTCH2Q9Y6C9 303 aa24■■□□□ 1.43
CPNE1-211ENST00000420363 QARSP47897 775 aaKnown RBP23.99■■□□□ 1.43
CPNE1-211ENST00000420363 LPIN1Q14693 890 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 TARBP2Q15633 366 aaKnown RBP23.99■■□□□ 1.43
CPNE1-211ENST00000420363 KIAA0319LQ8IZA0 1049 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 ZNF710Q8N1W2 664 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 LINC01465Q8N7H1 131 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 BANK1Q8NDB2 785 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 SEPT9Q9UHD8 586 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-211ENST00000420363 PCDHA12Q9UN75 941 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 LOXHD1Q8IVV2 1947 aa23.99■■□□□ 1.43
CPNE1-211ENST00000420363 STBD1O95210 358 aa23.98■■□□□ 1.43
CPNE1-211ENST00000420363 GHRP10912 638 aa23.98■■□□□ 1.43
CPNE1-211ENST00000420363 NEK9Q8TD19 979 aa23.98■■□□□ 1.43
CPNE1-211ENST00000420363 CELF4Q9BZC1 486 aaKnown RBP23.98■■□□□ 1.43
CPNE1-211ENST00000420363 OSBPL7Q9BZF2 842 aa23.98■■□□□ 1.43
CPNE1-211ENST00000420363 PPME1Q9Y570 386 aa23.98■■□□□ 1.43
CPNE1-211ENST00000420363 ARID2Q68CP9 1835 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms