RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 LPIN1Q14693 890 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 FBXO47Q5MNV8 452 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 TMCO2Q7Z6W1 182 aaPredicted RBP12.62□□□□□ -0.39
RFFL-204ENST00000414419 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 METTL13Q8N6R0 699 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
RFFL-204ENST00000414419 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 RAD9AQ99638 391 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 CELF4Q9BZC1 486 aaKnown RBP12.62□□□□□ -0.39
RFFL-204ENST00000414419 GINS2Q9Y248 185 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 SQORQ9Y6N5 450 aa12.62□□□□□ -0.39
RFFL-204ENST00000414419 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
RFFL-204ENST00000414419 UPP2O95045 317 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 IGFBP4P22692 258 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 GUCY1B3Q02153 619 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 ST3GAL1Q11201 340 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
RFFL-204ENST00000414419 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
RFFL-204ENST00000414419 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 OSBPL7Q9BZF2 842 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 SEPT9Q9UHD8 586 aaPredicted RBP12.61□□□□□ -0.39
RFFL-204ENST00000414419 INSL6Q9Y581 213 aa12.61□□□□□ -0.39
RFFL-204ENST00000414419 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 ZBTB42B2RXF5 422 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 C22orf31O95567 290 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 CD52P31358 61 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 PSMC5P62195 406 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 TAP1Q03518 808 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 TBC1D8BQ0IIM8 1120 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 PAK2Q13177 524 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 XKR3Q5GH77 459 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 EFCAB12Q6NXP0 572 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 ARNTL2Q8WYA1 636 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 YME1L1Q96TA2 773 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 FTHL17Q9BXU8 183 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 CERS4Q9HA82 394 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 KCNMB3Q9NPA1 279 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
RFFL-204ENST00000414419 TTC3P53804 2025 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 DDX11L8A8MPP1 907 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
RFFL-204ENST00000414419 ZNF862O60290 1169 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 ATP2B1P20020 1258 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 NFX1Q12986 1120 aaKnown RBP12.59□□□□□ -0.39
RFFL-204ENST00000414419 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 CALCRLQ16602 461 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 UGCGQ16739 394 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 MTERF2Q49AM1 385 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 NCAPH2Q6IBW4 605 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 B3GNT9Q6UX72 402 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 ZNF710Q8N1W2 664 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 BANK1Q8NDB2 785 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 PPM1EQ8WY54 764 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 TOP1MTQ969P6 601 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 SUGCTQ9HAC7 445 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 PCDHA12Q9UN75 941 aa12.59□□□□□ -0.39
RFFL-204ENST00000414419 CHD9Q3L8U1 2897 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 RBAK-RBAKDNI3L0D1 243 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 EML1O00423 815 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 ENPP3O14638 875 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 GPR182O15218 404 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 NEMFO60524 1076 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 RPS6KA5O75582 802 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 VTNP04004 478 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 P4HBP07237 508 aaKnown RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 QARSP47897 775 aaKnown RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 MCM2P49736 904 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 DNM2P50570 870 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 CLCN3P51790 818 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 CRYBB1P53674 252 aaPredicted RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 EPHA7Q15375 998 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 KIZQ2M2Z5 673 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 NLRC5Q86WI3 1866 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 LRRC71Q8N4P6 559 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 FBXO18Q8NFZ0 1043 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 HAS1Q92839 578 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 SCLT1Q96NL6 688 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 PPP1R16BQ96T49 567 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 NIFKQ9BYG3 293 aaKnown RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 FOXP1Q9H334 677 aaPredicted RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 AGO3Q9H9G7 860 aaKnown RBP12.58□□□□□ -0.4
RFFL-204ENST00000414419 VAV3Q9UKW4 847 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 PADI3Q9ULW8 664 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
RFFL-204ENST00000414419 LINC01553A4QN01 128 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 TXKP42681 527 aa12.57□□□□□ -0.4
RFFL-204ENST00000414419 NLRP11P59045 1033 aaKnown RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 HTRA4P83105 476 aaPredicted RBP12.57□□□□□ -0.4
RFFL-204ENST00000414419 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms