RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 UBN1Q9NPG3 1134 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 DDX28Q9NUL7 540 aaKnown RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 DIAPH2O60879 1101 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 CCDC92Q53HC0 331 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 L3MBTL1Q9Y468 752 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 PTPRTO14522 1441 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 SEMA3EO15041 775 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 SPDYE1Q8NFV5 336 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 VPS11Q9H270 941 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 PCCAP05165 728 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 GCFC2P16383 781 aaKnown RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 OSTNP61366 133 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 NECTIN1Q15223 517 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 KLC3Q6P597 504 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 KIAA2013Q8IYS2 634 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 TRMT2AQ8IZ69 625 aaKnown RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 SLC7A3Q8WY07 619 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 WDR24Q96S15 920 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 GTSE1Q9NYZ3 720 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 STX18Q9P2W9 335 aaKnown RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 DNAJC12Q9UKB3 198 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 MEFVO15553 781 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 ASPRV1Q53RT3 343 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 TAF1BQ53T94 588 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 CEP170P1Q96L14 293 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 TAF1DQ9H5J8 278 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-209ENST00000399352 FBXL5Q9UKA1 691 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 STRIP2Q9ULQ0 834 aa17.26■□□□□ 0.35
ITSN1-209ENST00000399352 ARHGEF9O43307 516 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 KRT38O76015 456 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 TJP3O95049 919 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 UBE2SQ16763 222 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 ACAD11Q709F0 780 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 TRAF3IP3Q9Y228 551 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 DIS3Q9Y2L1 958 aaKnown RBP17.25■□□□□ 0.35
ITSN1-209ENST00000399352 GTPBP10A4D1E9 387 aaKnown RBP17.25■□□□□ 0.35
ITSN1-209ENST00000399352 TEX33O43247 280 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 KDM1AO60341 852 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
ITSN1-209ENST00000399352 CYP2C19P33261 490 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 PPP1R2P3Q6NXS1 205 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 ZBTB33Q86T24 672 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 LCORLQ8N3X6 602 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 SLC17A8Q8NDX2 589 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 SFI1A8K8P3 1242 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
ITSN1-209ENST00000399352 ZNF18P17022 549 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 ADD2P35612 726 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 MORF4L2Q15014 288 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 FAM81BQ96LP2 452 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 POLD4Q9HCU8 107 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 MED7O43513 233 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 PSMA2P25787 234 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 NR1H3Q13133 447 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 GPATCH4Q5T3I0 446 aaKnown RBP17.25■□□□□ 0.35
ITSN1-209ENST00000399352 SH2D3CQ8N5H7 860 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 DTX3LQ8TDB6 740 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 CEP72Q9P209 647 aa17.25■□□□□ 0.35
ITSN1-209ENST00000399352 CNOT8Q9UFF9 292 aaKnown RBP17.25■□□□□ 0.35
ITSN1-209ENST00000399352 MIF4GDA9UHW6 222 aaKnown RBP17.24■□□□□ 0.35
ITSN1-209ENST00000399352 H0YIN7 160 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 ZRANB2O95218 330 aaKnown RBP eCLIP17.24■□□□□ 0.35
ITSN1-209ENST00000399352 SOX5P35711 763 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 CYTH1Q15438 398 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 DOK7Q18PE1 504 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 PARD3BQ8TEW8 1205 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 HOOK2Q96ED9 719 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 ATP2B4P23634 1241 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 PPP6R3Q5H9R7 873 aaPredicted RBP17.24■□□□□ 0.35
ITSN1-209ENST00000399352 RABGAP1LQ5R372 815 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 MARCH10Q8NA82 808 aaPredicted RBP17.24■□□□□ 0.35
ITSN1-209ENST00000399352 ORAI2Q96SN7 254 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 PMLP29590 882 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 PPM1NQ8N819 430 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 KLC2Q9H0B6 622 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 SNX25Q9H3E2 840 aa17.24■□□□□ 0.35
ITSN1-209ENST00000399352 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
ITSN1-209ENST00000399352 FAM160B1Q5W0V3 765 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 STAMBPL1Q96FJ0 436 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 ELF1P32519 619 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 TFDP1Q14186 410 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 ERICH1Q86X53 443 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 ZNF229Q9UJW7 825 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 PPIP5K2O43314 1243 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 PPP1R37O75864 691 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 PTPREP23469 700 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 MTF1Q14872 753 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 CCNYL1Q8N7R7 359 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 EHD2Q9NZN4 543 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 TAC1P20366 129 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 VPS39Q96JC1 886 aa17.23■□□□□ 0.35
ITSN1-209ENST00000399352 RAP1GDS1P52306 607 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms