RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 FOSL2P15408 326 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 MSH2P43246 934 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 KPNA2P52292 529 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 KYNUQ16719 465 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 EXOC3L4Q17RC7 722 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ARHGAP15Q53QZ3 475 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 DNAJC24Q6P3W2 148 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 RASSF3Q86WH2 238 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 SPATA2LQ8IUW3 424 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 PMM1Q92871 262 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 EEF2KMTQ96G04 330 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 DNAJC1Q96KC8 554 aaKnown RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 CABS1Q96KC9 395 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 FHDC1Q9C0D6 1143 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 RAB17Q9H0T7 212 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 RERGLQ9H628 205 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ELP3Q9H9T3 547 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ARHGEF3Q9NR81 526 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 PIM2Q9P1W9 311 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 TSKSQ9UJT2 592 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.42
BRCA1-203ENST00000357654 ZHX2Q9Y6X8 837 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 WDR62O43379 1518 aa6.21□□□□□ -1.42
BRCA1-203ENST00000357654 GPAA1O43292 621 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SASH1O94885 1247 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 NUDT14O95848 222 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SDSP20132 328 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 NR5A1Q13285 461 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 FOPNLQ96NB1 174 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 LRRC37BQ96QE4 947 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 WRNIP1Q96S55 665 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TRIM54Q9BYV2 358 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TRPV6Q9H1D0 765 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 NGRNQ9NPE2 291 aaKnown RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 PRG3Q9Y2Y8 225 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 KLHL18O94889 574 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 HOXA13P31271 388 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 RBBP4Q09028 425 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ICE2Q659A1 982 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SYTL1Q8IYJ3 562 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SCYL3Q8IZE3 742 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 AGR3Q8TD06 166 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 CCHCR1Q8TD31 782 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 THOC1Q96FV9 657 aaKnown RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 THTPAQ9BU02 230 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 BBS2Q9BXC9 721 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 KDM4CQ9H3R0 1056 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ATP8A2Q9NTI2 1148 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 GINM1Q9NU53 330 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 RNF123Q5XPI4 1314 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 LRRC14BA6NHZ5 514 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 PSAPP07602 524 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 DHX9Q08211 1270 aaKnown RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 MRPL28Q13084 256 aaKnown RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 MGAT5BQ3V5L5 792 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TIGD7Q6NT04 549 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF438Q7Z4V0 828 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 OR6J1Q8NGC5 347 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 STAG1Q8WVM7 1258 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 DEPDC7Q96QD5 511 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 KDM2BQ8NHM5 1336 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 PFDN1O60925 122 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 HSPA4LO95757 839 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 PLS3P13797 630 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 CA4P22748 312 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 CUL4AQ13619 759 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF235Q14590 738 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ZKSCAN8Q15776 578 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SLC44A4Q53GD3 710 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TTC23Q5W5X9 447 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 IL31Q6EBC2 164 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 PHACTR4Q8IZ21 702 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 MYOCDQ8IZQ8 938 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 FAF2Q96CS3 445 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 NT5C1BQ96P26 610 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SLC4A9Q96Q91 983 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TSSK1BQ9BXA7 367 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SPATA16Q9BXB7 569 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 EPC1Q9H2F5 836 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ECT2Q9H8V3 914 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 CCDC78A2IDD5 438 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 MYO1GB0I1T2 1018 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ZNF197O14709 1029 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 LUC7L3O95232 432 aaKnown RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 CFAP221Q4G0U5 840 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ATP11CQ8NB49 1132 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ASPSCR1Q9BZE9 553 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 TRIM15Q9C019 465 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 RPS6KB2Q9UBS0 482 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ATP6V1HQ9UI12 483 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 KCNH3Q9ULD8 1083 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 KIAA1024Q9UPX6 916 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SOS2Q07890 1332 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 SYNCRIPO60506 623 aaKnown RBP6.2□□□□□ -1.42
BRCA1-203ENST00000357654 NDUFS2O75306 463 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 ZBED1O96006 694 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 KRT20P35900 424 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 IFNAR2P48551 515 aa6.2□□□□□ -1.42
BRCA1-203ENST00000357654 EIF2B5Q13144 721 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms