RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TMOD4Q9NZQ9 345 aa19.36■□□□□ 0.69
APP-202ENST00000348990 BZW2Q9Y6E2 419 aaKnown RBP19.36■□□□□ 0.69
APP-202ENST00000348990 PARP4Q9UKK3 1724 aaKnown RBP19.36■□□□□ 0.69
APP-202ENST00000348990 SRRM3A6NNA2 597 aaPredicted RBP19.35■□□□□ 0.69
APP-202ENST00000348990 MYBP10242 640 aa19.35■□□□□ 0.69
APP-202ENST00000348990 GALCP54803 685 aa19.35■□□□□ 0.69
APP-202ENST00000348990 BYSLQ13895 437 aaKnown RBP19.35■□□□□ 0.69
APP-202ENST00000348990 C10orf76Q5T2E6 689 aa19.35■□□□□ 0.69
APP-202ENST00000348990 IRF2BP2Q7Z5L9 587 aa19.35■□□□□ 0.69
APP-202ENST00000348990 ANKRD42Q8N9B4 389 aa19.35■□□□□ 0.69
APP-202ENST00000348990 MICAL1Q8TDZ2 1067 aa19.35■□□□□ 0.69
APP-202ENST00000348990 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
APP-202ENST00000348990 FAM129AQ9BZQ8 928 aa19.35■□□□□ 0.69
APP-202ENST00000348990 GANQ9H2C0 597 aa19.35■□□□□ 0.69
APP-202ENST00000348990 KDM4CQ9H3R0 1056 aa19.35■□□□□ 0.69
APP-202ENST00000348990 GCNT4Q9P109 453 aa19.35■□□□□ 0.69
APP-202ENST00000348990 LOC102724428A0A0B4J2F2 783 aa19.35■□□□□ 0.69
APP-202ENST00000348990 C21orf2O43822 256 aa19.35■□□□□ 0.69
APP-202ENST00000348990 SIK1P57059 783 aa19.35■□□□□ 0.69
APP-202ENST00000348990 XRCC4Q13426 336 aa19.35■□□□□ 0.69
APP-202ENST00000348990 LRCH2Q5VUJ6 765 aa19.35■□□□□ 0.69
APP-202ENST00000348990 KIF2BQ8N4N8 673 aa19.35■□□□□ 0.69
APP-202ENST00000348990 DBR1Q9UK59 544 aaKnown RBP19.35■□□□□ 0.69
APP-202ENST00000348990 GCKP35557 465 aa19.35■□□□□ 0.69
APP-202ENST00000348990 SLC16A2P36021 539 aa19.35■□□□□ 0.69
APP-202ENST00000348990 EIF3BP55884 814 aaKnown RBP19.35■□□□□ 0.69
APP-202ENST00000348990 ERMARDQ5T6L9 678 aa19.35■□□□□ 0.69
APP-202ENST00000348990 NSRP1Q9H0G5 558 aaKnown RBP19.35■□□□□ 0.69
APP-202ENST00000348990 PTPN22Q9Y2R2 807 aa19.35■□□□□ 0.69
APP-202ENST00000348990 COL18A1P39060 1754 aa19.35■□□□□ 0.69
APP-202ENST00000348990 CLSTN1O94985 981 aa19.34■□□□□ 0.69
APP-202ENST00000348990 STAT1P42224 750 aa19.34■□□□□ 0.69
APP-202ENST00000348990 ADCY1Q08828 1119 aa19.34■□□□□ 0.69
APP-202ENST00000348990 PDIA5Q14554 519 aa19.34■□□□□ 0.69
APP-202ENST00000348990 ZKSCAN8Q15776 578 aaPredicted RBP19.34■□□□□ 0.69
APP-202ENST00000348990 ARHGAP44Q17R89 818 aa19.34■□□□□ 0.69
APP-202ENST00000348990 FBXO25Q8TCJ0 367 aa19.34■□□□□ 0.69
APP-202ENST00000348990 MYH3P11055 1940 aa19.34■□□□□ 0.69
APP-202ENST00000348990 FGFR4P22455 802 aa19.34■□□□□ 0.69
APP-202ENST00000348990 PICALMQ13492 652 aa19.34■□□□□ 0.69
APP-202ENST00000348990 ZCWPW2Q504Y3 356 aa19.34■□□□□ 0.69
APP-202ENST00000348990 LRRC57Q8N9N7 239 aa19.34■□□□□ 0.69
APP-202ENST00000348990 POTEFA5A3E0 1075 aa19.33■□□□□ 0.69
APP-202ENST00000348990 POTEIP0CG38 1075 aa19.33■□□□□ 0.69
APP-202ENST00000348990 PON1P27169 355 aa19.33■□□□□ 0.69
APP-202ENST00000348990 POTEGQ6S5H5 508 aa19.33■□□□□ 0.69
APP-202ENST00000348990 POTEEQ6S8J3 1075 aa19.33■□□□□ 0.69
APP-202ENST00000348990 FMNL3Q8IVF7 1028 aa19.33■□□□□ 0.69
APP-202ENST00000348990 TRPM8Q7Z2W7 1104 aa19.33■□□□□ 0.69
APP-202ENST00000348990 SLC35G2Q8TBE7 412 aa19.33■□□□□ 0.69
APP-202ENST00000348990 NT5C3AQ9H0P0 336 aa19.33■□□□□ 0.69
APP-202ENST00000348990 RASAL2Q9UJF2 1139 aa19.33■□□□□ 0.69
APP-202ENST00000348990 ANP32DO95626 131 aa19.33■□□□□ 0.68
APP-202ENST00000348990 CASP5P51878 434 aa19.33■□□□□ 0.68
APP-202ENST00000348990 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.68
APP-202ENST00000348990 P3H4Q92791 437 aa19.33■□□□□ 0.68
APP-202ENST00000348990 ATP6V0A4Q9HBG4 840 aa19.33■□□□□ 0.68
APP-202ENST00000348990 ABCF3Q9NUQ8 709 aa19.33■□□□□ 0.68
APP-202ENST00000348990 PPP1R9AQ9ULJ8 1098 aa19.33■□□□□ 0.68
APP-202ENST00000348990 ALS2Q96Q42 1657 aa19.33■□□□□ 0.68
APP-202ENST00000348990 GRIK5Q16478 980 aa19.32■□□□□ 0.68
APP-202ENST00000348990 NT5DC3Q86UY8 548 aa19.32■□□□□ 0.68
APP-202ENST00000348990 KSR1Q8IVT5 923 aa19.32■□□□□ 0.68
APP-202ENST00000348990 EPS8L3Q8TE67 593 aaKnown RBP19.32■□□□□ 0.68
APP-202ENST00000348990 KLHL29Q96CT2 875 aa19.32■□□□□ 0.68
APP-202ENST00000348990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.32■□□□□ 0.68
APP-202ENST00000348990 CHORDC1Q9UHD1 332 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 SFI1A8K8P3 1242 aa19.32■□□□□ 0.68
APP-202ENST00000348990 DIAPH2O60879 1101 aa19.32■□□□□ 0.68
APP-202ENST00000348990 GCNT3O95395 438 aa19.32■□□□□ 0.68
APP-202ENST00000348990 CRYMQ14894 314 aa19.32■□□□□ 0.68
APP-202ENST00000348990 AADACL2Q6P093 401 aa19.32■□□□□ 0.68
APP-202ENST00000348990 NBPF5PQ86XG9 351 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 SEMA4AQ9H3S1 761 aa19.32■□□□□ 0.68
APP-202ENST00000348990 SUCLA2Q9P2R7 463 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 MTRF1LQ9UGC7 380 aaKnown RBP19.32■□□□□ 0.68
APP-202ENST00000348990 DNAJC8O75937 253 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 CYP4A11Q02928 519 aa19.32■□□□□ 0.68
APP-202ENST00000348990 LACTB2Q53H82 288 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 NAIF1Q69YI7 327 aaPredicted RBP19.32■□□□□ 0.68
APP-202ENST00000348990 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
APP-202ENST00000348990 SPDL1Q96EA4 605 aa19.32■□□□□ 0.68
APP-202ENST00000348990 ERP44Q9BS26 406 aa19.32■□□□□ 0.68
APP-202ENST00000348990 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.32■□□□□ 0.68
APP-202ENST00000348990 C5orf60A6NFR6 353 aa19.31■□□□□ 0.68
APP-202ENST00000348990 MPHOSPH10O00566 681 aaKnown RBP19.31■□□□□ 0.68
APP-202ENST00000348990 DDX3XO00571 662 aaKnown RBP eCLIP19.31■□□□□ 0.686e-27■■■■□ 24.2
APP-202ENST00000348990 MGRN1O60291 552 aa19.31■□□□□ 0.68
APP-202ENST00000348990 CASP4P49662 377 aa19.31■□□□□ 0.68
APP-202ENST00000348990 ITPK1Q13572 414 aa19.31■□□□□ 0.68
APP-202ENST00000348990 SFR1Q86XK3 245 aa19.31■□□□□ 0.68
APP-202ENST00000348990 EIF1ADQ8N9N8 165 aaKnown RBP19.31■□□□□ 0.68
APP-202ENST00000348990 MTFR1LQ9H019 292 aa19.31■□□□□ 0.68
APP-202ENST00000348990 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
APP-202ENST00000348990 PPIP5K2O43314 1243 aa19.31■□□□□ 0.68
APP-202ENST00000348990 UBOX5O94941 541 aa19.31■□□□□ 0.68
APP-202ENST00000348990 CHRM1P11229 460 aaPredicted RBP19.31■□□□□ 0.68
APP-202ENST00000348990 TNFAIP3P21580 790 aa19.31■□□□□ 0.68
APP-202ENST00000348990 BTDP43251 543 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms