RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 HSF2BPO75031 334 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 KIAA1755Q5JYT7 1200 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 LRCH2Q5VUJ6 765 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 MOXD1Q6UVY6 613 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 GBP6Q6ZN66 633 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 AP1M1Q9BXS5 423 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 NAGPAQ9UK23 515 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 RRP15Q9Y3B9 282 aaKnown RBP19.05■□□□□ 0.64
COL9A1-201ENST00000320755 TBX3O15119 743 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 KRT14P02533 472 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 RPL13P26373 211 aaKnown RBP19.05■□□□□ 0.64
COL9A1-201ENST00000320755 CYP2J2P51589 502 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 U2AF1L4Q8WU68 220 aaKnown RBP19.05■□□□□ 0.64
COL9A1-201ENST00000320755 SLC35C1Q96A29 364 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 CCDC43Q96MW1 224 aaKnown RBP19.05■□□□□ 0.64
COL9A1-201ENST00000320755 TYW1Q9NV66 732 aaKnown RBP19.05■□□□□ 0.64
COL9A1-201ENST00000320755 PCDHGC5Q9Y5F6 944 aa19.05■□□□□ 0.64
COL9A1-201ENST00000320755 DDX39AO00148 427 aaKnown RBP19.04■□□□□ 0.64
COL9A1-201ENST00000320755 MYO1CO00159 1063 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 ARHGAP27Q6ZUM4 889 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 EPM2AIP1Q7L775 607 aaPredicted RBP19.04■□□□□ 0.64
COL9A1-201ENST00000320755 SH2D3CQ8N5H7 860 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 WDR18Q9BV38 432 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.04■□□□□ 0.64
COL9A1-201ENST00000320755 HSPA1LP34931 641 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 HLTFQ14527 1009 aaKnown RBP eCLIP19.04■□□□□ 0.64
COL9A1-201ENST00000320755 EPHA7Q15375 998 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 GMCL1Q96IK5 515 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 LTBP1Q14766 1721 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 EYA4O95677 639 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 EMBQ6PCB8 327 aa19.04■□□□□ 0.64
COL9A1-201ENST00000320755 TGFB1I1O43294 461 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 STAT2P52630 851 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 ZC3H3Q8IXZ2 948 aaKnown RBP19.03■□□□□ 0.64
COL9A1-201ENST00000320755 GMCL1P1Q8NEA9 526 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 ZIM3Q96PE6 472 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 SEPT11Q9NVA2 429 aaKnown RBP19.03■□□□□ 0.64
COL9A1-201ENST00000320755 H0YIN7 160 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 TULP2O00295 520 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 RAD51CO43502 376 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 SLITRK3O94933 977 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 DPY19L2P1Q6NXN4 242 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 FAM186BQ8IYM0 893 aa19.03■□□□□ 0.64
COL9A1-201ENST00000320755 INPP4AQ96PE3 977 aaPredicted RBP19.03■□□□□ 0.64
COL9A1-201ENST00000320755 APBA3O96018 575 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 ATP1A2P50993 1020 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 SRLQ86TD4 932 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 CASKIN2Q8WXE0 1202 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 ANKRD31Q8N7Z5 1873 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 GAS7O60861 476 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 TRIM49P0CI25 452 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 TRIM49CP0CI26 452 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 CFAP58Q5T655 872 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 PLCB1Q9NQ66 1216 aa19.02■□□□□ 0.64
COL9A1-201ENST00000320755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.02■□□□□ 0.64
COL9A1-201ENST00000320755 OPA1O60313 960 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 FLOT1O75955 427 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 ABCB4P21439 1286 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 MIGA2Q7L4E1 593 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 OTOP1Q7RTM1 612 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 DDX42Q86XP3 938 aaKnown RBP eCLIP19.02■□□□□ 0.63
COL9A1-201ENST00000320755 USP38Q8NB14 1042 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 CENPHQ9H3R5 247 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 METTL14Q9HCE5 456 aaKnown RBP19.02■□□□□ 0.63
COL9A1-201ENST00000320755 RNF14Q9UBS8 474 aa19.02■□□□□ 0.63
COL9A1-201ENST00000320755 KIF4AO95239 1232 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 CIITAP33076 1130 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 HSD17B14Q9BPX1 270 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 SIX2Q9NPC8 291 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 SERPINA10Q9UK55 444 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 IGLV3-22A0A075B6J6 115 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 H2AFZP0C0S5 128 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 PAK2Q13177 524 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 ARHGAP44Q17R89 818 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 GLE1Q53GS7 698 aaKnown RBP19.01■□□□□ 0.63
COL9A1-201ENST00000320755 TTMPQ5BVD1 217 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 H2AFVQ71UI9 128 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 PEX26Q7Z412 305 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 DAAM2Q86T65 1068 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 VPS36Q86VN1 386 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 GLYCTKQ8IVS8 523 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 SH2D3AQ9BRG2 576 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 POLR3CQ9BUI4 534 aaPredicted RBP19.01■□□□□ 0.63
COL9A1-201ENST00000320755 FBXO28Q9NVF7 368 aa19.01■□□□□ 0.63
COL9A1-201ENST00000320755 FEZ2Q9UHY8 353 aaPredicted RBP19.01■□□□□ 0.63
COL9A1-201ENST00000320755 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
COL9A1-201ENST00000320755 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 IRAK1P51617 712 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 GNGT1P63211 74 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 ODR4Q5SWX8 454 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 FAM178BQ8IXR5 827 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 BANK1Q8NDB2 785 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 CAPS2Q9BXY5 557 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 PARVGQ9HBI0 331 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 WRAP73Q9P2S5 460 aaPredicted RBP19■□□□□ 0.63
COL9A1-201ENST00000320755 BZW2Q9Y6E2 419 aaKnown RBP19■□□□□ 0.63
COL9A1-201ENST00000320755 SCN9AQ15858 1988 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 GCOM1H8Y6P7 765 aaPredicted RBP19■□□□□ 0.63
COL9A1-201ENST00000320755 DDX3XO00571 662 aaKnown RBP eCLIP19■□□□□ 0.63
COL9A1-201ENST00000320755 POLR2MP0CAP2 368 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms