RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ETNPPLQ8TBG4 499 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 GOLPH3Q9H4A6 298 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ATP6V0A4Q9HBG4 840 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 CYLDQ9NQC7 956 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 TMEM260Q9NX78 707 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 NYAP2Q9P242 653 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 WDR90Q96KV7 1748 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 KLRF2D3W0D1 207 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ASAP2O43150 1006 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 ITGBL1O95965 494 aaPredicted RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 CCNB1P14635 433 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 SHMT1P34896 483 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 DRG2P55039 364 aaKnown RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 CMPK2Q5EBM0 449 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 PROCA1Q8NCQ7 364 aaPredicted RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 ANKRD20A12PQ8NF67 263 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 TBC1D16Q8TBP0 767 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 DCAF4Q8WV16 495 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 C7orf43Q8WVR3 580 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 CNKSR1Q969H4 720 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 DYNLL2Q96FJ2 89 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 GMCL1Q96IK5 515 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 NOC4LQ9BVI4 516 aaKnown RBP5.97□□□□□ -1.45
VPS50-202ENST00000305866 RABEP2Q9H5N1 569 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 SLC5A4Q9NY91 659 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 NAGPAQ9UK23 515 aa5.97□□□□□ -1.45
VPS50-202ENST00000305866 KDM3AQ9Y4C1 1321 aa5.96□□□□□ -1.45
VPS50-202ENST00000305866 TSPY2A6NKD2 308 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 ANKRD63C9JTQ0 380 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 EBAG9O00559 213 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 KIAA0391O15091 583 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 ATP6V1G2O95670 118 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 FGFR1OPO95684 399 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 GM2AP17900 193 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 PON1P27169 355 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 INPP5BP32019 993 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 ATP1A2P50993 1020 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 COASYQ13057 564 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 AP3B2Q13367 1082 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 MYBPC2Q14324 1141 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 GPATCH4Q5T3I0 446 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 VSTM1Q6UX27 236 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 CRELD2Q6UXH1 353 aaPredicted RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 PALB2Q86YC2 1186 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 PGM2Q96G03 612 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 SGSM3Q96HU1 749 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 ZDHHC15Q96MV8 337 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 MXD3Q9BW11 206 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 CPVLQ9H3G5 476 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 JMJD4Q9H9V9 463 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 SLC39A2Q9NP94 309 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 SUCLA2Q9P2R7 463 aaPredicted RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 SUFUQ9UMX1 484 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 RTCBQ9Y3I0 505 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 CEP83Q9Y592 693 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 CAPN7Q9Y6W3 813 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 GMNCA6NCL1 334 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 SLC16A3O15427 465 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 BUB1O43683 1085 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 KIF1CO43896 1103 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 GJB6O95452 261 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 FTCDO95954 541 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 CCDC40Q4G0X9 1142 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 MFSD5Q6N075 450 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 EP400NLQ6ZTU2 488 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 SIAH1Q8IUQ4 282 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 RASSF8Q8NHQ8 419 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 RBM17Q96I25 401 aaKnown RBP5.96□□□□□ -1.46
VPS50-202ENST00000305866 FAM107BQ9H098 131 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 ARHGEF3Q9NR81 526 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 DMAC2Q9NW81 257 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 MCM9Q9NXL9 1143 aa5.96□□□□□ -1.46
VPS50-202ENST00000305866 CHUKO15111 745 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 TGFB1I1O43294 461 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 OPA1O60313 960 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 TDP2O95551 362 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PTENP60484 403 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 NCALDP61601 193 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 GUCY2DQ02846 1103 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 PDE4DQ08499 809 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 KIF5AQ12840 1032 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 NBPF5PQ86XG9 351 aaPredicted RBP5.95□□□□□ -1.46
VPS50-202ENST00000305866 ANKRD13CQ8N6S4 541 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SLC44A5Q8NCS7 719 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 ALG3Q92685 438 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CEP95Q96GE4 821 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CCDC17Q96LX7 622 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 EYA3Q99504 573 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 HAUS2Q9NVX0 235 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 POLLQ9UGP5 575 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 DAGLAQ9Y4D2 1042 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CCDC194A0A1B0GVG4 234 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CAND2O75155 1236 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS50-202ENST00000305866 MTA2O94776 668 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 FGFR1P11362 822 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 CETPP11597 493 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 ELF1P32519 619 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 BTDP43251 543 aa5.95□□□□□ -1.46
VPS50-202ENST00000305866 ZNF131P52739 623 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms