RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 NOVA2Q9UNW9 492 aaKnown RBP17.65■□□□□ 0.42
BRD3-201ENST00000303407 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
BRD3-201ENST00000303407 ANKRD40Q6AI12 368 aa17.65■□□□□ 0.42
BRD3-201ENST00000303407 EMBQ6PCB8 327 aa17.65■□□□□ 0.42
BRD3-201ENST00000303407 ZMYND12Q9H0C1 365 aa17.65■□□□□ 0.42
BRD3-201ENST00000303407 MRFAP1Q9Y605 127 aa17.65■□□□□ 0.42
BRD3-201ENST00000303407 F5H6K3 240 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 MCF2LO15068 1137 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 NCK2O43639 380 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 SUN1O94901 812 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 SRGAP2CP0DJJ0 459 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 KLRC3Q07444 240 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 ITKQ08881 620 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 SBK1Q52WX2 424 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 ATP6V0A4Q9HBG4 840 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 A0A1W2PQC6 194 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 RWDD2BP57060 319 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 NEK9Q8TD19 979 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 TACO1Q9BSH4 297 aaKnown RBP17.64■□□□□ 0.41
BRD3-201ENST00000303407 HDAC6Q9UBN7 1215 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 TECPR2O15040 1411 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 ARHGEF28Q8N1W1 1705 aaKnown RBP17.64■□□□□ 0.41
BRD3-201ENST00000303407 NR1D1P20393 614 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 CCZ1BP86790 482 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 CCZ1P86791 482 aaPredicted RBP17.64■□□□□ 0.41
BRD3-201ENST00000303407 GUF1Q8N442 669 aaKnown RBP17.64■□□□□ 0.41
BRD3-201ENST00000303407 VCX3BQ9H321 246 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 PFDN4Q9NQP4 134 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 NTSR2O95665 410 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 GYS2P54840 703 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 SLFN12LQ6IEE8 588 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 SCYL1Q96KG9 808 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 RMDN3Q96TC7 470 aa17.64■□□□□ 0.41
BRD3-201ENST00000303407 FLT1P17948 1338 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 GARSP41250 739 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 NAA30Q147X3 362 aaPredicted RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 MTF1Q14872 753 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 SNX25Q9H3E2 840 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 PLAAQ9Y263 795 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 K7ERI5 159 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 GCLMP48507 274 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 NFRKBQ6P4R8 1299 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 GSPT2Q8IYD1 628 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 CCHCR1Q8TD31 782 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 CNOT10Q9H9A5 744 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 LIMA1Q9UHB6 759 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 SLC16A4O15374 487 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 NAALADL2Q58DX5 795 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 CDKL2Q92772 493 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 CAPN11Q9UMQ6 739 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 DEPDC5O75140 1603 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 USP11P51784 963 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 GPR162Q16538 588 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 RPS6KC1Q96S38 1066 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 OSBPL9Q96SU4 736 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 EIF2AK1Q9BQI3 630 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 ZNF277Q9NRM2 450 aaPredicted RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 MAP2P11137 1827 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 SURF1Q15526 300 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 DARS2Q6PI48 645 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 DDX23Q9BUQ8 820 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 INTS2Q9H0H0 1204 aaKnown RBP17.63■□□□□ 0.41
BRD3-201ENST00000303407 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
BRD3-201ENST00000303407 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 NPHP3-ACAD11A0A0J9YXS1 232 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 CCDC188H7C350 402 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 CFAP57Q96MR6 1250 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 RPF1Q9H9Y2 349 aaKnown RBP17.62■□□□□ 0.41
BRD3-201ENST00000303407 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 TBK1Q9UHD2 729 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
BRD3-201ENST00000303407 A0A1B0GTH6 734 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 ARHGAP42A6NI28 874 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 NXNQ6DKJ4 435 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 XXYLT1Q8NBI6 393 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 TBC1D16Q8TBP0 767 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 LRRD1A4D1F6 860 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 WDR64B1ANS9 1081 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 ABL1P00519 1130 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 SAT1P21673 171 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 SH3BP5O60239 455 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
BRD3-201ENST00000303407 CLTAP09496 248 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
BRD3-201ENST00000303407 OR6B2Q6IFH4 312 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 EPC1Q9H2F5 836 aa17.62■□□□□ 0.41
BRD3-201ENST00000303407 HMGB1P1B2RPK0 211 aaPredicted RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 MSH2P43246 934 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 ZKSCAN8Q15776 578 aaPredicted RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 PLCD3Q8N3E9 789 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 HEXIM2Q96MH2 286 aaKnown RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 RASGRF2O14827 1237 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 EIF3BP55884 814 aaKnown RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 BASP1P80723 227 aaKnown RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 PSMD6Q15008 389 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 CALN1Q9BXU9 219 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms