RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PTPREP23469 700 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 C6orf118Q5T5N4 469 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 IQANK1A0A1B0GTG1 560 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 MXI1P50539 228 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 ALS2CLQ60I27 953 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 ASAP1Q9ULH1 1129 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 YEATS2Q9ULM3 1422 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 TRAPPC8Q9Y2L5 1435 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 GOLGA8CPA6NN73 597 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 GOLGA8RI6L899 631 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 ANP32DO95626 131 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 RESTQ13127 1097 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 ERFEQ4G0M1 354 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 ALKBH5Q6P6C2 394 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 KRT26Q7Z3Y9 468 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 TADA2BQ86TJ2 420 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 GANCQ8TET4 914 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 SAAL1Q96ER3 474 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 NRBF2Q96F24 287 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 MFAP3LO75121 409 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 TTLL1O95922 423 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 TSPY1Q01534 308 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 TFDP1Q14186 410 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 THNSL1Q8IYQ7 743 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 OR6B3Q8NGW1 331 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 SERPINI1Q99574 410 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 KLHL11Q9NVR0 708 aa18.01■□□□□ 0.47
TSPAN3-201ENST00000267970 CCDC151A5D8V7 595 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 CACNB3P54284 484 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 FRA10AC1Q70Z53 315 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 SNX19Q92543 992 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 ZC3H12BQ5HYM0 836 aaKnown RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 SREK1IP1Q8N9Q2 155 aaPredicted RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 FAM49AQ9H0Q0 323 aaPredicted RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 L3MBTL1Q9Y468 752 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 SSH2Q76I76 1423 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 POTEMA6NI47 508 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 TRIM37O94972 964 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 HOXB7P09629 217 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 ZBED6P86452 979 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 CCDC124Q96CT7 223 aaKnown RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 METTL23Q86XA0 190 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 MIS12Q9H081 205 aa18■□□□□ 0.47
TSPAN3-201ENST00000267970 UPF3AQ9H1J1 476 aaKnown RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 DYNC1LI1Q9Y6G9 523 aaKnown RBP18■□□□□ 0.47
TSPAN3-201ENST00000267970 LRRC53A6NM62 1247 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 PDE8BO95263 885 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 ERICH1Q86X53 443 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 DTX3LQ8TDB6 740 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 SLC13A4Q9UKG4 626 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 NMT2O60551 498 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 PHKG2P15735 406 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 CCDC144BQ3MJ40 725 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 MSTO1Q9BUK6 570 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 EDEM3Q9BZQ6 932 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 MRPL47Q9HD33 250 aaKnown RBP17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 GOLGA8QA0A0J9YX86 632 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 GOLGA8OA6NCC3 632 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 HMGB1P1B2RPK0 211 aaPredicted RBP17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 GOLGA8NF8WBI6 632 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 ATP2B4P23634 1241 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 RAD23BP54727 409 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 VCPP55072 806 aaKnown RBP17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 CYTH1Q15438 398 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 SLC26A7Q8TE54 656 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 BHMT2Q9H2M3 363 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 THAP9Q9H5L6 903 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 ZSCAN9O15535 394 aaPredicted RBP17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 GUCY1A3Q02108 690 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 SPARCL1Q14515 664 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 GALNT17Q6IS24 598 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 TRIM55Q9BYV6 548 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 DDX47Q9H0S4 455 aaKnown RBP17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 STK17AQ9UEE5 414 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 DNAJC12Q9UKB3 198 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 ZNF185O15231 689 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 RAD17O75943 681 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
TSPAN3-201ENST00000267970 FGFR4P22455 802 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 GCLMP48507 274 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 RWDD2BP57060 319 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 MYO1EQ12965 1108 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 TMC4Q7Z404 712 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 PPM1NQ8N819 430 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 TGS1Q96RS0 853 aaKnown RBP17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 COG4Q9H9E3 785 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 CCDC78A2IDD5 438 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 TYW5A2RUC4 315 aaKnown RBP17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 ADCY2Q08462 1091 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 BEGAINQ9BUH8 593 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 KIF17Q9P2E2 1029 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 ITM2BQ9Y287 266 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
TSPAN3-201ENST00000267970 CYP2D6P10635 497 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms