RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W RRN3P36070 627 aa-0.15□□□□□ -2.43
RDS3YPR094W APE3P37302 537 aaKnown RBP-0.15□□□□□ -2.43
RDS3YPR094W YBR241CP38142 488 aa-0.15□□□□□ -2.43
RDS3YPR094W ECM8P38246 354 aa-0.15□□□□□ -2.43
RDS3YPR094W LSM12P38828 187 aaKnown RBP-0.15□□□□□ -2.43
RDS3YPR094W RBG1P39729 369 aa-0.15□□□□□ -2.43
RDS3YPR094W DOT5P40553 215 aa-0.15□□□□□ -2.43
RDS3YPR094W YCH1P42937 148 aa-0.15□□□□□ -2.43
RDS3YPR094W AIP1P46680 615 aaKnown RBP-0.15□□□□□ -2.43
RDS3YPR094W CTK3P46963 296 aaPredicted RBP-0.15□□□□□ -2.43
RDS3YPR094W ROG1P53118 685 aa-0.15□□□□□ -2.43
RDS3YPR094W YGR066CP53242 292 aa-0.15□□□□□ -2.43
RDS3YPR094W ALF1P53904 254 aa-0.15□□□□□ -2.43
RDS3YPR094W SMD1Q02260 146 aaPredicted RBP-0.15□□□□□ -2.43
RDS3YPR094W GIP3Q03016 1276 aa-0.15□□□□□ -2.43
RDS3YPR094W MRX11Q03079 207 aa-0.15□□□□□ -2.43
RDS3YPR094W MSC3Q05812 728 aa-0.15□□□□□ -2.43
RDS3YPR094W SNT309Q06091 175 aaPredicted RBP-0.15□□□□□ -2.43
RDS3YPR094W YOL029CQ08187 201 aa-0.15□□□□□ -2.43
RDS3YPR094W YOR283WQ12040 230 aaKnown RBP-0.15□□□□□ -2.43
RDS3YPR094W LDB17Q12342 491 aa-0.15□□□□□ -2.43
RDS3YPR094W TFC7Q12415 435 aa-0.15□□□□□ -2.43
RDS3YPR094W PRP46Q12417 451 aaPredicted RBP-0.15□□□□□ -2.43
RDS3YPR094W FOB1O13329 566 aa-0.16□□□□□ -2.44
RDS3YPR094W GPH1P06738 902 aaKnown RBP-0.16□□□□□ -2.44
RDS3YPR094W DFR1P07807 211 aaKnown RBP RIP-Chip data-0.16□□□□□ -2.44not detected
RDS3YPR094W SSC1P0CS90 654 aaKnown RBP-0.16□□□□□ -2.44
RDS3YPR094W CHA1P25379 360 aaKnown RBP-0.16□□□□□ -2.44
RDS3YPR094W SOR1P35497 357 aaKnown RBP-0.16□□□□□ -2.44
RDS3YPR094W YBR056WP38081 501 aa-0.16□□□□□ -2.44
RDS3YPR094W NRG2P38082 220 aa-0.16□□□□□ -2.44
RDS3YPR094W CST26P38226 397 aa-0.16□□□□□ -2.44
RDS3YPR094W SHE3P38272 425 aaKnown RBP-0.16□□□□□ -2.44
RDS3YPR094W GEP4P38812 185 aa-0.16□□□□□ -2.44
RDS3YPR094W YER188WP40103 239 aa-0.16□□□□□ -2.44
RDS3YPR094W VTC2P43585 828 aa-0.16□□□□□ -2.44
RDS3YPR094W DAN1P47178 298 aa-0.16□□□□□ -2.44
RDS3YPR094W RNH201P53942 307 aa-0.16□□□□□ -2.44
RDS3YPR094W TAF12Q03761 539 aa-0.16□□□□□ -2.44
RDS3YPR094W YDR222WQ04925 415 aa-0.16□□□□□ -2.44
RDS3YPR094W SOR2Q07786 357 aa-0.16□□□□□ -2.44
RDS3YPR094W HUA2Q12134 243 aa-0.16□□□□□ -2.44
RDS3YPR094W SFM1Q12314 213 aa-0.16□□□□□ -2.44
RDS3YPR094W NCA2Q12374 616 aa-0.16□□□□□ -2.44
RDS3YPR094W HTZ1Q12692 134 aaKnown RBP-0.16□□□□□ -2.44
RDS3YPR094W YHR086W-AQ3E746 53 aa-0.16□□□□□ -2.44
RDS3YPR094W SPS4P09937 338 aa-0.17□□□□□ -2.44
RDS3YPR094W IMA3P0CW40 589 aa-0.17□□□□□ -2.44
RDS3YPR094W IMA4P0CW41 589 aa-0.17□□□□□ -2.44
RDS3YPR094W UNG1P12887 359 aa-0.17□□□□□ -2.44
RDS3YPR094W CBS1P14066 229 aa-0.17□□□□□ -2.44
RDS3YPR094W PPH22P23595 377 aa-0.17□□□□□ -2.44
RDS3YPR094W RHB1P25378 209 aa-0.17□□□□□ -2.44
RDS3YPR094W RSA4P25382 515 aaKnown RBP-0.17□□□□□ -2.44
RDS3YPR094W GEX1P25596 615 aa-0.17□□□□□ -2.44
RDS3YPR094W SEC66P33754 206 aa-0.17□□□□□ -2.44
RDS3YPR094W SPO23P33757 523 aa-0.17□□□□□ -2.44
RDS3YPR094W PMT1P33775 817 aa-0.17□□□□□ -2.44
RDS3YPR094W SHE1P38200 338 aa-0.17□□□□□ -2.44
RDS3YPR094W MMS4P38257 691 aa-0.17□□□□□ -2.44
RDS3YPR094W MET28P40573 187 aa-0.17□□□□□ -2.44
RDS3YPR094W TOS3P43637 560 aa-0.17□□□□□ -2.44
RDS3YPR094W RPS0BP46654 252 aaKnown RBP-0.17□□□□□ -2.44
RDS3YPR094W PHO86P46956 311 aa-0.17□□□□□ -2.44
RDS3YPR094W MRX6P48564 524 aa-0.17□□□□□ -2.44
RDS3YPR094W ASN2P49090 572 aaKnown RBP-0.17□□□□□ -2.44
RDS3YPR094W YGR015CP53208 328 aa-0.17□□□□□ -2.44
RDS3YPR094W TWF1P53250 332 aa-0.17□□□□□ -2.44
RDS3YPR094W SED5Q01590 340 aa-0.17□□□□□ -2.44
RDS3YPR094W CGI121Q03705 181 aaKnown RBP-0.17□□□□□ -2.44
RDS3YPR094W GIR2Q03768 265 aaPredicted RBP-0.17□□□□□ -2.44
RDS3YPR094W API2Q04413 109 aa-0.17□□□□□ -2.44
RDS3YPR094W PEX30Q06169 523 aa-0.17□□□□□ -2.44
RDS3YPR094W IMA2Q08295 589 aa-0.17□□□□□ -2.44
RDS3YPR094W ATG34Q12292 412 aa-0.17□□□□□ -2.44
RDS3YPR094W YML133CQ03099 1374 aa-0.18□□□□□ -2.44
RDS3YPR094W YLL067CQ07888 1374 aa-0.18□□□□□ -2.44
RDS3YPR094W YLL066CQ99208 1374 aa-0.18□□□□□ -2.44
RDS3YPR094W STE2D6VTK4 431 aa-0.18□□□□□ -2.44
RDS3YPR094W RPS18AP0CX55 146 aaKnown RBP-0.18□□□□□ -2.44
RDS3YPR094W RPS18BP0CX56 146 aaPredicted RBP-0.18□□□□□ -2.44
RDS3YPR094W HOM3P10869 527 aa-0.18□□□□□ -2.44
RDS3YPR094W MET8P15807 274 aa-0.18□□□□□ -2.44
RDS3YPR094W FAR1P21268 830 aa-0.18□□□□□ -2.44
RDS3YPR094W ATP3P38077 311 aaKnown RBP-0.18□□□□□ -2.44
RDS3YPR094W YEL057CP39983 233 aa-0.18□□□□□ -2.44
RDS3YPR094W FCY21P40039 528 aa-0.18□□□□□ -2.44
RDS3YPR094W LSM4P40070 187 aaKnown RBP-0.18□□□□□ -2.44
RDS3YPR094W YJR054WP47114 497 aa-0.18□□□□□ -2.44
RDS3YPR094W RRP46P53256 223 aaPredicted RBP-0.18□□□□□ -2.44
RDS3YPR094W MEP3P53390 489 aa-0.18□□□□□ -2.44
RDS3YPR094W PRM1P53835 661 aa-0.18□□□□□ -2.44
RDS3YPR094W REX2P54964 269 aaKnown RBP-0.18□□□□□ -2.44
RDS3YPR094W URH1Q04179 340 aa-0.18□□□□□ -2.44
RDS3YPR094W APC4Q04601 652 aa-0.18□□□□□ -2.44
RDS3YPR094W DXO1Q06349 442 aa-0.18□□□□□ -2.44
RDS3YPR094W SIL1Q08199 421 aa-0.18□□□□□ -2.44
RDS3YPR094W RKM1Q08961 583 aaPredicted RBP-0.18□□□□□ -2.44
RDS3YPR094W YPR063CQ12160 140 aa-0.18□□□□□ -2.44
RDS3YPR094W HIF1Q12373 385 aa-0.18□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms