RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C FET3P38993 636 aa3.92□□□□□ -1.78
VHS3YOR054C RGI1P40043 161 aaPredicted RBP3.92□□□□□ -1.78
VHS3YOR054C TOK1P40310 691 aa3.92□□□□□ -1.78
VHS3YOR054C PGD1P40356 397 aa3.92□□□□□ -1.78
VHS3YOR054C GYP8P43570 497 aa3.92□□□□□ -1.78
VHS3YOR054C RET2P43621 546 aa3.92□□□□□ -1.78
VHS3YOR054C AAD10P47182 288 aa3.92□□□□□ -1.78
VHS3YOR054C AZR1P50080 613 aa3.92□□□□□ -1.78
VHS3YOR054C COS12P53053 380 aa3.92□□□□□ -1.78
VHS3YOR054C HCH1P53834 153 aa3.92□□□□□ -1.78
VHS3YOR054C SLM2P53955 656 aa3.92□□□□□ -1.78
VHS3YOR054C TOF2Q02208 771 aa3.92□□□□□ -1.78
VHS3YOR054C NUP116Q02630 1113 aa3.92□□□□□ -1.78
VHS3YOR054C YPL108WQ02872 168 aaPredicted RBP3.92□□□□□ -1.78
VHS3YOR054C HAS1Q03532 505 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C YDR109CQ04585 715 aa3.92□□□□□ -1.78
VHS3YOR054C RCO1Q04779 684 aa3.92□□□□□ -1.78
VHS3YOR054C GAS2Q06135 555 aa3.92□□□□□ -1.78
VHS3YOR054C YDL121CQ07541 149 aa3.92□□□□□ -1.78
VHS3YOR054C RRP40Q08285 240 aaKnown RBP3.92□□□□□ -1.78
VHS3YOR054C LAP2Q10740 671 aa3.92□□□□□ -1.78
VHS3YOR054C YLR126CQ12288 251 aa3.92□□□□□ -1.78
VHS3YOR054C SFM1Q12314 213 aa3.92□□□□□ -1.78
VHS3YOR054C PNS1Q12412 539 aa3.92□□□□□ -1.78
VHS3YOR054C CDC28P00546 298 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C TCP1P12612 559 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C ART10P18634 518 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C PHO91P27514 894 aa3.91□□□□□ -1.78
VHS3YOR054C TMT1P32643 299 aa3.91□□□□□ -1.78
VHS3YOR054C PTK1P36002 662 aaPredicted RBP3.91□□□□□ -1.78
VHS3YOR054C PRS3P38689 320 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C PTC7P38797 343 aa3.91□□□□□ -1.78
VHS3YOR054C COG3P40094 801 aa3.91□□□□□ -1.78
VHS3YOR054C YIL024CP40543 189 aa3.91□□□□□ -1.78
VHS3YOR054C YJL218WP40892 196 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C CIN5P40917 295 aa3.91□□□□□ -1.78
VHS3YOR054C PFA3P42836 336 aa3.91□□□□□ -1.78
VHS3YOR054C ABM1P47146 123 aa3.91□□□□□ -1.78
VHS3YOR054C MCM22P47167 239 aa3.91□□□□□ -1.78
VHS3YOR054C PAC10P48363 199 aa3.91□□□□□ -1.78
VHS3YOR054C YGL039WP53183 348 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C SWC4P53201 476 aa3.91□□□□□ -1.78
VHS3YOR054C ART5P53244 586 aaKnown RBP3.91□□□□□ -1.78
VHS3YOR054C BUD32P53323 261 aa3.91□□□□□ -1.78
VHS3YOR054C CAC2Q04199 468 aa3.91□□□□□ -1.78
VHS3YOR054C OPT2Q06593 877 aa3.91□□□□□ -1.78
VHS3YOR054C ATX2Q12067 313 aa3.91□□□□□ -1.78
VHS3YOR054C SPC3Q12133 184 aa3.91□□□□□ -1.78
VHS3YOR054C AFI1Q99222 893 aa3.91□□□□□ -1.78
VHS3YOR054C MET3P08536 511 aa3.9□□□□□ -1.78
VHS3YOR054C MATALPHA1P0CY06 175 aa3.9□□□□□ -1.78
VHS3YOR054C HMLALPHA1P0CY07 175 aa3.9□□□□□ -1.78
VHS3YOR054C MAG1P22134 296 aaKnown RBP3.9□□□□□ -1.78
VHS3YOR054C MNE1P24720 663 aa3.9□□□□□ -1.78
VHS3YOR054C GID7P25569 745 aa3.9□□□□□ -1.78
VHS3YOR054C YCR102CP25608 368 aa3.9□□□□□ -1.78
VHS3YOR054C TAH1P25638 111 aaPredicted RBP3.9□□□□□ -1.78
VHS3YOR054C SYN8P31377 255 aa3.9□□□□□ -1.78
VHS3YOR054C SCD5P34758 872 aa3.9□□□□□ -1.78
VHS3YOR054C TUL1P36096 758 aa3.9□□□□□ -1.78
VHS3YOR054C FLO10P36170 1169 aa3.9□□□□□ -1.78
VHS3YOR054C SOL2P37262 315 aa3.9□□□□□ -1.78
VHS3YOR054C MAL32P38158 584 aa3.9□□□□□ -1.78
VHS3YOR054C AVT5P38176 459 aa3.9□□□□□ -1.78
VHS3YOR054C AIM18P38884 321 aa3.9□□□□□ -1.78
VHS3YOR054C VAB2P40003 282 aa3.9□□□□□ -1.78
VHS3YOR054C DOT6P40059 670 aaKnown RBP3.9□□□□□ -1.78
VHS3YOR054C RGI2P40188 164 aa3.9□□□□□ -1.78
VHS3YOR054C YGR201CP42936 225 aa3.9□□□□□ -1.78
VHS3YOR054C AIM22P47051 409 aa3.9□□□□□ -1.78
VHS3YOR054C TIM13P53299 105 aa3.9□□□□□ -1.78
VHS3YOR054C MAL12P53341 584 aa3.9□□□□□ -1.78
VHS3YOR054C MKC7P53379 596 aa3.9□□□□□ -1.78
VHS3YOR054C ALG11P53954 548 aaKnown RBP3.9□□□□□ -1.78
VHS3YOR054C DOT1Q04089 582 aaKnown RBP3.9□□□□□ -1.78
VHS3YOR054C NHX1Q04121 633 aa3.9□□□□□ -1.78
VHS3YOR054C SMA2Q04658 369 aa3.9□□□□□ -1.78
VHS3YOR054C TMA10Q06177 86 aa3.9□□□□□ -1.78
VHS3YOR054C ESC8Q08119 714 aa3.9□□□□□ -1.78
VHS3YOR054C YPL260WQ08977 551 aa3.9□□□□□ -1.78
VHS3YOR054C PET9P18239 318 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C DCC1P25559 380 aa3.9□□□□□ -1.79
VHS3YOR054C YCR015CP25616 317 aa3.9□□□□□ -1.79
VHS3YOR054C CDC50P25656 391 aa3.9□□□□□ -1.79
VHS3YOR054C BUB2P26448 306 aaPredicted RBP3.9□□□□□ -1.79
VHS3YOR054C MSN2P33748 704 aa3.9□□□□□ -1.79
VHS3YOR054C WBP1P33767 430 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C SEF1P34228 1148 aa3.9□□□□□ -1.79
VHS3YOR054C OAR1P35731 278 aa3.9□□□□□ -1.79
VHS3YOR054C DHR2P36009 735 aaPredicted RBP3.9□□□□□ -1.79
VHS3YOR054C SNU114P36048 1008 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C APL3P38065 1025 aa3.9□□□□□ -1.79
VHS3YOR054C TCM62P38228 572 aaKnown RBP3.9□□□□□ -1.79
VHS3YOR054C HSL7P38274 827 aa3.9□□□□□ -1.79
VHS3YOR054C PEX32P38292 413 aa3.9□□□□□ -1.79
VHS3YOR054C FTH1P38310 465 aa3.9□□□□□ -1.79
VHS3YOR054C ERV46P39727 415 aa3.9□□□□□ -1.79
VHS3YOR054C HPA3P39979 161 aa3.9□□□□□ -1.79
VHS3YOR054C ALG8P40351 577 aa3.9□□□□□ -1.79
VHS3YOR054C IRC24P40580 263 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms