RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C SNG1P46950 547 aa3.6□□□□□ -1.83
CIT1YNR001C FMP33P46998 180 aa3.6□□□□□ -1.83
CIT1YNR001C MND1P53102 219 aa3.6□□□□□ -1.83
CIT1YNR001C MSC1Q03104 513 aa3.6□□□□□ -1.83
CIT1YNR001C YML108WQ03759 105 aa3.6□□□□□ -1.83
CIT1YNR001C CAB5Q03941 241 aa3.6□□□□□ -1.83
CIT1YNR001C RRP17Q04031 235 aaPredicted RBP3.6□□□□□ -1.83
CIT1YNR001C KRE28Q04431 385 aa3.6□□□□□ -1.83
CIT1YNR001C RRN11Q04712 507 aa3.6□□□□□ -1.83
CIT1YNR001C YMR226CQ05016 267 aaKnown RBP3.6□□□□□ -1.83
CIT1YNR001C PIG1Q06216 648 aa3.6□□□□□ -1.83
CIT1YNR001C GGA1Q06336 557 aa3.6□□□□□ -1.83
CIT1YNR001C THI3Q07471 609 aa3.6□□□□□ -1.83
CIT1YNR001C NSE1Q07913 336 aa3.6□□□□□ -1.83
CIT1YNR001C YAP7Q08182 245 aa3.6□□□□□ -1.83
CIT1YNR001C RKM1Q08961 583 aaPredicted RBP3.6□□□□□ -1.83
CIT1YNR001C SLM3Q12093 417 aa3.6□□□□□ -1.83
CIT1YNR001C SSK22P25390 1331 aaPredicted RBP3.59□□□□□ -1.83
CIT1YNR001C CMD1P06787 147 aaKnown RBP3.59□□□□□ -1.84
CIT1YNR001C ATP10P18496 279 aa3.59□□□□□ -1.84
CIT1YNR001C DOA4P32571 926 aa3.59□□□□□ -1.84
CIT1YNR001C NRP1P32770 719 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84not detected
CIT1YNR001C SSO1P32867 290 aa3.59□□□□□ -1.84
CIT1YNR001C TPO5P36029 618 aa3.59□□□□□ -1.84
CIT1YNR001C ROT2P38138 954 aa3.59□□□□□ -1.84
CIT1YNR001C DUG2P38149 878 aa3.59□□□□□ -1.84
CIT1YNR001C BNA4P38169 460 aa3.59□□□□□ -1.84
CIT1YNR001C YMR262WP38430 313 aa3.59□□□□□ -1.84
CIT1YNR001C SHC1P39000 512 aa3.59□□□□□ -1.84
CIT1YNR001C AIM10P39965 576 aaKnown RBP3.59□□□□□ -1.84
CIT1YNR001C ALD5P40047 520 aaKnown RBP3.59□□□□□ -1.84
CIT1YNR001C PAC11P40960 533 aa3.59□□□□□ -1.84
CIT1YNR001C THI7Q05998 598 aa3.59□□□□□ -1.84
CIT1YNR001C SEC10Q06245 871 aa3.59□□□□□ -1.84
CIT1YNR001C MRPL35Q06678 367 aa3.59□□□□□ -1.84
CIT1YNR001C YOL107WQ12239 342 aa3.59□□□□□ -1.84
CIT1YNR001C LDB17Q12342 491 aa3.59□□□□□ -1.84
CIT1YNR001C SFG1Q12507 346 aa3.59□□□□□ -1.84
CIT1YNR001C DCP1Q12517 231 aaPredicted RBP3.59□□□□□ -1.84
CIT1YNR001C YNL162W-AQ3E7A8 72 aa3.59□□□□□ -1.84
CIT1YNR001C IRA1P18963 3092 aa3.58□□□□□ -1.84
CIT1YNR001C SCEIP03882 235 aa3.58□□□□□ -1.84
CIT1YNR001C RPL24AP04449 155 aaKnown RBP3.58□□□□□ -1.84
CIT1YNR001C NFT1P0CE68 1218 aa3.58□□□□□ -1.84
CIT1YNR001C RSR1P13856 272 aa3.58□□□□□ -1.84
CIT1YNR001C KSS1P14681 368 aa3.58□□□□□ -1.84
CIT1YNR001C VPS1P21576 704 aaKnown RBP3.58□□□□□ -1.84
CIT1YNR001C YCR006CP25350 157 aa3.58□□□□□ -1.84
CIT1YNR001C SRL3P36167 246 aa3.58□□□□□ -1.84
CIT1YNR001C YBR139WP38109 508 aa3.58□□□□□ -1.84
CIT1YNR001C PCA1P38360 1216 aa3.58□□□□□ -1.84
CIT1YNR001C RFC3P38629 340 aa3.58□□□□□ -1.84
CIT1YNR001C ALP1P38971 573 aa3.58□□□□□ -1.84
CIT1YNR001C YEL020CP39994 560 aa3.58□□□□□ -1.84
CIT1YNR001C SMX2P40204 77 aaKnown RBP3.58□□□□□ -1.84
CIT1YNR001C ATM1P40416 690 aa3.58□□□□□ -1.84
CIT1YNR001C SYG1P40528 902 aa3.58□□□□□ -1.84
CIT1YNR001C LOC1P43586 204 aaPredicted RBP3.58□□□□□ -1.84
CIT1YNR001C TAX4P47030 604 aa3.58□□□□□ -1.84
CIT1YNR001C BNA3P47039 444 aaKnown RBP3.58□□□□□ -1.84
CIT1YNR001C MIG2P53035 382 aa3.58□□□□□ -1.84
CIT1YNR001C YNL247WP53852 767 aaKnown RBP3.58□□□□□ -1.84
CIT1YNR001C IMP4P53941 290 aaKnown RBP3.58□□□□□ -1.84
CIT1YNR001C KTR5P53966 522 aaPredicted RBP3.58□□□□□ -1.84
CIT1YNR001C URC2Q04411 772 aa3.58□□□□□ -1.84
CIT1YNR001C APC4Q04601 652 aa3.58□□□□□ -1.84
CIT1YNR001C HRD3Q05787 833 aa3.58□□□□□ -1.84
CIT1YNR001C RRG8Q06109 277 aa3.58□□□□□ -1.84
CIT1YNR001C YLR173WQ06247 608 aa3.58□□□□□ -1.84
CIT1YNR001C YLR177WQ06251 628 aa3.58□□□□□ -1.84
CIT1YNR001C RPS10AQ08745 105 aaPredicted RBP3.58□□□□□ -1.84
CIT1YNR001C HRT3Q12347 344 aa3.58□□□□□ -1.84
CIT1YNR001C EMP46Q12396 444 aa3.58□□□□□ -1.84
CIT1YNR001C YLR462WO13556 202 aa3.57□□□□□ -1.84
CIT1YNR001C YPR089WO13585 888 aa3.57□□□□□ -1.84
CIT1YNR001C PGK1P00560 416 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C BI2P03873 423 aa3.57□□□□□ -1.84
CIT1YNR001C ADE4P04046 510 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C PEP4P07267 405 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C CAR2P07991 424 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C YLL053CP0CD98 152 aa3.57□□□□□ -1.84
CIT1YNR001C CLN3P13365 580 aa3.57□□□□□ -1.84
CIT1YNR001C HXT2P23585 541 aa3.57□□□□□ -1.84
CIT1YNR001C ITR2P30606 609 aa3.57□□□□□ -1.84
CIT1YNR001C CYS4P32582 507 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C YSC83P32792 385 aa3.57□□□□□ -1.84
CIT1YNR001C PAD1P33751 242 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
CIT1YNR001C MTR2P34232 184 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C VPS21P36017 210 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C MIA40P36046 403 aa3.57□□□□□ -1.84
CIT1YNR001C TCM62P38228 572 aaKnown RBP3.57□□□□□ -1.84
CIT1YNR001C POP4P38336 279 aa3.57□□□□□ -1.84
CIT1YNR001C ERG7P38604 731 aa3.57□□□□□ -1.84
CIT1YNR001C YHL049CP38722 271 aa3.57□□□□□ -1.84
CIT1YNR001C STN1P38960 494 aa3.57□□□□□ -1.84
CIT1YNR001C YEL075CP39972 122 aa3.57□□□□□ -1.84
CIT1YNR001C YER189WP40104 122 aa3.57□□□□□ -1.84
CIT1YNR001C STB1P42845 420 aa3.57□□□□□ -1.84
CIT1YNR001C YFL064CP43540 174 aa3.57□□□□□ -1.84
CIT1YNR001C RPS10BP46784 105 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms