RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C FRE7Q12333 620 aa1.9□□□□□ -2.1
RTT101YJL047C RPL35AP0CX84 120 aaKnown RBP1.9□□□□□ -2.11
RTT101YJL047C RPL35BP0CX85 120 aaKnown RBP1.9□□□□□ -2.11
RTT101YJL047C CBF1P17106 351 aa1.9□□□□□ -2.11
RTT101YJL047C TYR1P20049 452 aa1.9□□□□□ -2.11
RTT101YJL047C NUP1P20676 1076 aa1.9□□□□□ -2.11
RTT101YJL047C PTP1P25044 335 aa1.9□□□□□ -2.11
RTT101YJL047C MXR2P25566 168 aa1.9□□□□□ -2.11
RTT101YJL047C MIC12P38341 106 aa1.9□□□□□ -2.11
RTT101YJL047C FMP52P40008 231 aa1.9□□□□□ -2.11
RTT101YJL047C YER079WP40052 210 aaKnown RBP1.9□□□□□ -2.11
RTT101YJL047C LAS21P40367 830 aa1.9□□□□□ -2.11
RTT101YJL047C CDC1P40986 491 aa1.9□□□□□ -2.11
RTT101YJL047C LYS20P48570 428 aaKnown RBP1.9□□□□□ -2.11
RTT101YJL047C CWC23P52868 283 aaPredicted RBP1.9□□□□□ -2.11
RTT101YJL047C DUG3P53871 357 aa1.9□□□□□ -2.11
RTT101YJL047C DIA1P54005 336 aa1.9□□□□□ -2.11
RTT101YJL047C DLT1Q04216 342 aa1.9□□□□□ -2.11
RTT101YJL047C YDR222WQ04925 415 aa1.9□□□□□ -2.11
RTT101YJL047C YMR034CQ05131 434 aaPredicted RBP1.9□□□□□ -2.11
RTT101YJL047C ASA1Q06822 443 aa1.9□□□□□ -2.11
RTT101YJL047C AAD15Q08361 143 aa1.9□□□□□ -2.11
RTT101YJL047C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
RTT101YJL047C SUT2Q12286 268 aa1.9□□□□□ -2.11
RTT101YJL047C RKM5Q12367 367 aa1.9□□□□□ -2.11
RTT101YJL047C YCL012CQ8J0M4 134 aa1.9□□□□□ -2.11
RTT101YJL047C SEC3P33332 1336 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C RAD7P06779 565 aa1.89□□□□□ -2.11
RTT101YJL047C DST1P07273 309 aa1.89□□□□□ -2.11
RTT101YJL047C SNF3P10870 884 aa1.89□□□□□ -2.11
RTT101YJL047C CLN3P13365 580 aa1.89□□□□□ -2.11
RTT101YJL047C RPO26P20435 155 aa1.89□□□□□ -2.11
RTT101YJL047C UTR1P21373 530 aa1.89□□□□□ -2.11
RTT101YJL047C CLB2P24869 491 aa1.89□□□□□ -2.11
RTT101YJL047C RAD57P25301 460 aa1.89□□□□□ -2.11
RTT101YJL047C FUN19P28003 413 aaPredicted RBP1.89□□□□□ -2.11
RTT101YJL047C POP5P28005 173 aa1.89□□□□□ -2.11
RTT101YJL047C SPS19P32573 292 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C PRS4P38063 326 aaPredicted RBP1.89□□□□□ -2.11
RTT101YJL047C ERV46P39727 415 aa1.89□□□□□ -2.11
RTT101YJL047C ERG28P40030 148 aa1.89□□□□□ -2.11
RTT101YJL047C BTT1P40314 149 aaPredicted RBP1.89□□□□□ -2.11
RTT101YJL047C POP1P41812 875 aa1.89□□□□□ -2.11
RTT101YJL047C PMT6P42934 759 aa1.89□□□□□ -2.11
RTT101YJL047C YFL015CP43578 164 aa1.89□□□□□ -2.11
RTT101YJL047C NAS6P50086 228 aa1.89□□□□□ -2.11
RTT101YJL047C YIF1P53845 314 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C MPS1P54199 764 aa1.89□□□□□ -2.11
RTT101YJL047C ORC3P54790 616 aa1.89□□□□□ -2.11
RTT101YJL047C GCN5Q03330 439 aa1.89□□□□□ -2.11
RTT101YJL047C SNU56Q03782 492 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C YDR132CQ03900 495 aa1.89□□□□□ -2.11
RTT101YJL047C YDR387CQ04162 555 aa1.89□□□□□ -2.11
RTT101YJL047C HSP31Q04432 237 aa1.89□□□□□ -2.11
RTT101YJL047C DCR2Q05924 578 aa1.89□□□□□ -2.11
RTT101YJL047C ATG26Q06321 1198 aa1.89□□□□□ -2.11
RTT101YJL047C VIK1Q12045 647 aa1.89□□□□□ -2.11
RTT101YJL047C YRA1Q12159 226 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C RUP1Q12242 671 aa1.89□□□□□ -2.11
RTT101YJL047C YKL183C-AQ3E765 70 aa1.89□□□□□ -2.11
RTT101YJL047C THP2O13539 261 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C SUC2P00724 532 aa1.89□□□□□ -2.11
RTT101YJL047C RAD1P06777 1100 aa1.89□□□□□ -2.11
RTT101YJL047C TRP4P07285 380 aaPredicted RBP1.89□□□□□ -2.11
RTT101YJL047C BAR1P12630 587 aa1.89□□□□□ -2.11
RTT101YJL047C PMA2P19657 947 aa1.89□□□□□ -2.11
RTT101YJL047C RPS2P25443 254 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C MRPS5P33759 307 aa1.89□□□□□ -2.11
RTT101YJL047C TAF14P35189 244 aa1.89□□□□□ -2.11
RTT101YJL047C MYO3P36006 1272 aa1.89□□□□□ -2.11
RTT101YJL047C APL3P38065 1025 aa1.89□□□□□ -2.11
RTT101YJL047C HIS2P38635 335 aa1.89□□□□□ -2.11
RTT101YJL047C EGD2P38879 174 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C MIT1P40002 666 aa1.89□□□□□ -2.11
RTT101YJL047C YNL194CP40169 301 aa1.89□□□□□ -2.11
RTT101YJL047C YMR134WP40207 237 aa1.89□□□□□ -2.11
RTT101YJL047C LYS12P40495 371 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C YIL060WP40519 144 aa1.89□□□□□ -2.11
RTT101YJL047C MRX5P47007 382 aa1.89□□□□□ -2.11
RTT101YJL047C PHB2P50085 310 aa1.89□□□□□ -2.11
RTT101YJL047C TAF6P53040 516 aa1.89□□□□□ -2.11
RTT101YJL047C PKP2P53170 491 aa1.89□□□□□ -2.11
RTT101YJL047C NOP19P53317 196 aaPredicted RBP1.89□□□□□ -2.11
RTT101YJL047C SMM1P53720 384 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C YVH1Q02256 364 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C OST6Q03723 332 aa1.89□□□□□ -2.11
RTT101YJL047C UBX2Q04228 584 aa1.89□□□□□ -2.11
RTT101YJL047C NAT4Q04751 285 aa1.89□□□□□ -2.11
RTT101YJL047C GMC2Q06201 188 aa1.89□□□□□ -2.11
RTT101YJL047C SNA4Q07549 140 aa1.89□□□□□ -2.11
RTT101YJL047C SHS1Q07657 551 aa1.89□□□□□ -2.11
RTT101YJL047C ABP140Q08641 628 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C AHA1Q12449 350 aaKnown RBP1.89□□□□□ -2.11
RTT101YJL047C GAS1P22146 559 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C SLM5P25345 492 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C SAC1P32368 623 aaKnown RBP1.88□□□□□ -2.11
RTT101YJL047C TMT1P32643 299 aa1.88□□□□□ -2.11
RTT101YJL047C TOA2P32774 122 aa1.88□□□□□ -2.11
RTT101YJL047C REC114P32841 428 aa1.88□□□□□ -2.11
RTT101YJL047C UBC6P33296 250 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms