RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YEL043WP32618 956 aa2.13□□□□□ -2.07
NIC96YFR002W SDH3P33421 198 aa2.13□□□□□ -2.07
NIC96YFR002W PCH2P38126 564 aa2.13□□□□□ -2.07
NIC96YFR002W PCL7P40186 285 aa2.13□□□□□ -2.07
NIC96YFR002W ECM27P47144 725 aa2.13□□□□□ -2.07
NIC96YFR002W MRP51Q02950 344 aa2.13□□□□□ -2.07
NIC96YFR002W VTA1Q06263 330 aa2.13□□□□□ -2.07
NIC96YFR002W PHO84P25297 587 aaKnown RBP2.13□□□□□ -2.07
NIC96YFR002W SPB1P25582 841 aaPredicted RBP2.13□□□□□ -2.07
NIC96YFR002W PIM1P36775 1133 aa2.13□□□□□ -2.07
NIC96YFR002W YCR041WP37265 110 aa2.13□□□□□ -2.07
NIC96YFR002W SHE4P51534 789 aa2.13□□□□□ -2.07
NIC96YFR002W MLC1P53141 149 aa2.13□□□□□ -2.07
NIC96YFR002W PDR16P53860 351 aaKnown RBP2.13□□□□□ -2.07
NIC96YFR002W RHO5P53879 331 aaKnown RBP2.13□□□□□ -2.07
NIC96YFR002W ACL4Q03771 387 aa2.13□□□□□ -2.07
NIC96YFR002W DCI1Q08558 271 aa2.13□□□□□ -2.07
NIC96YFR002W RPC40P07703 335 aaKnown RBP2.12□□□□□ -2.07
NIC96YFR002W CLC1P17891 233 aa2.12□□□□□ -2.07
NIC96YFR002W HCS1P34243 683 aa2.12□□□□□ -2.07
NIC96YFR002W CBP4P37267 147 aa2.12□□□□□ -2.07
NIC96YFR002W MST28P39552 234 aa2.12□□□□□ -2.07
NIC96YFR002W OSW5P40219 148 aa2.12□□□□□ -2.07
NIC96YFR002W PRM5P40476 318 aa2.12□□□□□ -2.07
NIC96YFR002W WWM1P43582 211 aaKnown RBP2.12□□□□□ -2.07
NIC96YFR002W MNP1P53163 194 aaPredicted RBP2.12□□□□□ -2.07
NIC96YFR002W YGL039WP53183 348 aaKnown RBP2.12□□□□□ -2.07
NIC96YFR002W SIL1Q08199 421 aa2.12□□□□□ -2.07
NIC96YFR002W YDR034W-BQ6Q5X2 51 aa2.12□□□□□ -2.07
NIC96YFR002W PPQ1P32945 549 aa2.12□□□□□ -2.07
NIC96YFR002W SUR1P33300 382 aa2.12□□□□□ -2.07
NIC96YFR002W CCT2P39076 527 aaKnown RBP2.12□□□□□ -2.07
NIC96YFR002W YGR149WP48236 432 aa2.12□□□□□ -2.07
NIC96YFR002W ERV25P54837 211 aaKnown RBP2.12□□□□□ -2.07
NIC96YFR002W RAD61Q99359 647 aa2.12□□□□□ -2.07
NIC96YFR002W ARO3P14843 370 aaKnown RBP2.11□□□□□ -2.07
NIC96YFR002W ITR1P30605 584 aa2.11□□□□□ -2.07
NIC96YFR002W NIP100P33420 868 aa2.11□□□□□ -2.07
NIC96YFR002W MLH1P38920 769 aa2.11□□□□□ -2.07
NIC96YFR002W YIP1P53039 248 aa2.11□□□□□ -2.07
NIC96YFR002W HXT11P54862 567 aa2.11□□□□□ -2.07
NIC96YFR002W ADA2Q02336 434 aa2.11□□□□□ -2.07
NIC96YFR002W TRM44Q02648 567 aaKnown RBP2.11□□□□□ -2.07
NIC96YFR002W SPH1Q06160 661 aa2.11□□□□□ -2.07
NIC96YFR002W NOP6Q07623 225 aaKnown RBP2.11□□□□□ -2.07
NIC96YFR002W VPS54Q12071 889 aa2.11□□□□□ -2.07
NIC96YFR002W PET123P17558 318 aa2.11□□□□□ -2.07
NIC96YFR002W DBP3P20447 523 aaKnown RBP2.11□□□□□ -2.07
NIC96YFR002W SPS22P25380 463 aa2.11□□□□□ -2.07
NIC96YFR002W GEX1P25596 615 aa2.11□□□□□ -2.07
NIC96YFR002W AFG1P32317 509 aa2.11□□□□□ -2.07
NIC96YFR002W RIB7P33312 244 aa2.11□□□□□ -2.07
NIC96YFR002W YBR137WP38276 179 aa2.11□□□□□ -2.07
NIC96YFR002W RTT105P40063 208 aa2.11□□□□□ -2.07
NIC96YFR002W PAN6P40459 309 aa2.11□□□□□ -2.07
NIC96YFR002W CHS6P40955 746 aa2.11□□□□□ -2.07
NIC96YFR002W TFG2P41896 400 aaPredicted RBP2.11□□□□□ -2.07
NIC96YFR002W NCA3P46955 337 aa2.11□□□□□ -2.07
NIC96YFR002W PCP1P53259 346 aa2.11□□□□□ -2.07
NIC96YFR002W HST1P53685 503 aa2.11□□□□□ -2.07
NIC96YFR002W HRI1Q05905 244 aaKnown RBP2.11□□□□□ -2.07
NIC96YFR002W MDY2Q12285 212 aa2.11□□□□□ -2.07
NIC96YFR002W RHO2P06781 192 aa2.1□□□□□ -2.07
NIC96YFR002W RPS8AP0CX39 200 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W RPS8BP0CX40 200 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W SPO7P18410 259 aa2.1□□□□□ -2.07
NIC96YFR002W URA4P20051 364 aa2.1□□□□□ -2.07
NIC96YFR002W CLN1P20437 546 aa2.1□□□□□ -2.07
NIC96YFR002W TIP1P27654 210 aaPredicted RBP2.1□□□□□ -2.07
NIC96YFR002W MSG5P38590 489 aa2.1□□□□□ -2.07
NIC96YFR002W FAD1P38913 306 aa2.1□□□□□ -2.07
NIC96YFR002W COS5P47187 383 aa2.1□□□□□ -2.07
NIC96YFR002W TOM22P49334 152 aa2.1□□□□□ -2.07
NIC96YFR002W TIM11P81449 96 aaPredicted RBP2.1□□□□□ -2.07
NIC96YFR002W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
NIC96YFR002W SKO1Q02100 647 aa2.1□□□□□ -2.07
NIC96YFR002W COS7Q07788 383 aa2.1□□□□□ -2.07
NIC96YFR002W RTC5Q12108 567 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W HPR1P17629 752 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W RVS161P25343 265 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W RAD14P28519 371 aa2.1□□□□□ -2.07
NIC96YFR002W PRP21P32524 280 aaPredicted RBP2.1□□□□□ -2.07
NIC96YFR002W RIB5P38145 238 aa2.1□□□□□ -2.07
NIC96YFR002W EFM3P47163 339 aa2.1□□□□□ -2.07
NIC96YFR002W RPT4P53549 437 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W PPM1Q04081 328 aa2.1□□□□□ -2.07
NIC96YFR002W MGR3Q04472 501 aa2.1□□□□□ -2.07
NIC96YFR002W RRP45Q05636 305 aaKnown RBP2.1□□□□□ -2.07
NIC96YFR002W FDH1Q08911 376 aa2.1□□□□□ -2.07
NIC96YFR002W YPR022CQ12139 1133 aa2.1□□□□□ -2.07
NIC96YFR002W UBR2Q07963 1872 aa2.09□□□□□ -2.07
NIC96YFR002W OSM1P21375 501 aaKnown RBP2.09□□□□□ -2.07
NIC96YFR002W FAA1P30624 700 aaKnown RBP2.09□□□□□ -2.07
NIC96YFR002W NIP1P32497 812 aaKnown RBP2.09□□□□□ -2.07
NIC96YFR002W ECM25P32525 599 aa2.09□□□□□ -2.07
NIC96YFR002W PRS1P32895 427 aaKnown RBP2.09□□□□□ -2.07
NIC96YFR002W YDR089WP38966 869 aa2.09□□□□□ -2.07
NIC96YFR002W LAM5P43560 674 aa2.09□□□□□ -2.07
NIC96YFR002W SSN8P47821 323 aa2.09□□□□□ -2.07
NIC96YFR002W YGL138CP53122 345 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms