RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	COQ9	Q05779	260 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	CRT10	Q08226	957 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	SLF1	Q12034	447 aa	Known RBP	4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-BR	Q12217	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-NL2	Q12470	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	TY1A-GR2	Q12485	440 aa		4.16	□□□□□ -1.74
SSB1	YDL229W	ERG20	P08524	352 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	IMA3	P0CW40	589 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	IMA4	P0CW41	589 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	SPO7	P18410	259 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	SEC59	P20048	519 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	NUP1	P20676	1076 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	KIN82	P25341	720 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	ILV6	P25605	309 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	YPT7	P32939	208 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	SRB2	P34162	210 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	MCH2	P36032	473 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	SHM1	P37292	490 aa	Predicted RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	TCM62	P38228	572 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	GOS1	P38736	223 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	YHR078W	P38799	552 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	YHR097C	P38809	366 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	ATG7	P38862	630 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	PMT3	P47190	753 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	SGF73	P53165	657 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	NQM1	P53228	333 aa	Predicted RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	YGR079W	P53249	370 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	YPR003C	P53394	754 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	HXT11	P54862	567 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	AAT1	Q01802	451 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	ATC1	Q04005	294 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	YHC1	Q05900	231 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	YLR040C	Q07988	224 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	IMA2	Q08295	589 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	TCO89	Q08921	799 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	HRT3	Q12347	344 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	ERG27	Q12452	347 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	SNF8	Q12483	233 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	YLR361C-A	Q3E795	98 aa		4.15	□□□□□ -1.75
SSB1	YDL229W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.15	□□□□□ -1.75
SSB1	YDL229W	COX6	P00427	148 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ARG82	P07250	355 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	MSS18	P08593	268 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-DR6	P0CX70	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-ER1	P0CX71	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-LR2	P0CX72	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-PL	P0CX73	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-JR1	P0CX74	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-LR3	P0CX75	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-ML2	P0CX76	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	RAD18	P10862	487 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	REV1	P12689	985 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ARG8	P18544	423 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PEX4	P29340	183 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	APE2	P32454	952 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	HYM1	P32464	399 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	MRPL4	P36517	319 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ERV15	P38312	142 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PLB1	P39105	664 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	UBP5	P39944	805 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	HAT2	P39984	401 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	HIS6	P40545	261 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	RPL10	P41805	221 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	SER2	P42941	309 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ADO1	P47143	340 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	PEX31	P53203	462 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PUS6	P53294	404 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TIM13	P53299	105 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YIP3	P53633	176 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	NOG2	P53742	486 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	IDP3	P53982	420 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	DYN2	Q02647	92 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	MSC2	Q03455	724 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YMR210W	Q03649	449 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	AIM33	Q04516	312 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	SMA2	Q04658	369 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PEX30	Q06169	523 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	MRI1	Q06489	411 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	BSC6	Q08280	497 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YPL257W	Q08974	193 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YOR283W	Q12040	230 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-GR1	Q12085	440 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	TY1A-OL	Q92392	440 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	YOR111W	Q99210	232 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	YLR422W	Q06409	1932 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	COX4	P04037	155 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	HAP2	P06774	265 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	QCR2	P07257	368 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	RPL3	P14126	387 aa	Known RBP	4.14	□□□□□ -1.75
SSB1	YDL229W	CKA1	P15790	372 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	ZRC1	P20107	442 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PTC6	P25646	442 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	CSM1	P25651	190 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	UBC8	P28263	218 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	PRE4	P30657	266 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	COQ2	P32378	372 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	NUP2	P32499	720 aa		4.14	□□□□□ -1.75
SSB1	YDL229W	UGX2	P32772	223 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms