RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W YPT10P38146 199 aa1.94□□□□□ -2.1
VPS8YAL002W DUG2P38149 878 aa1.94□□□□□ -2.1
VPS8YAL002W YHR182WP38870 785 aa1.94□□□□□ -2.1
VPS8YAL002W EGD2P38879 174 aaKnown RBP1.94□□□□□ -2.1
VPS8YAL002W BNA6P43619 295 aa1.94□□□□□ -2.1
VPS8YAL002W STD1Q02794 444 aa1.94□□□□□ -2.1
VPS8YAL002W MSC1Q03104 513 aa1.94□□□□□ -2.1
VPS8YAL002W URH1Q04179 340 aa1.94□□□□□ -2.1
VPS8YAL002W SHS1Q07657 551 aa1.94□□□□□ -2.1
VPS8YAL002W AFT2Q08957 416 aa1.94□□□□□ -2.1
VPS8YAL002W YDR262WQ12331 272 aa1.94□□□□□ -2.1
VPS8YAL002W COX3P00420 269 aa1.93□□□□□ -2.1
VPS8YAL002W ITR1P30605 584 aa1.93□□□□□ -2.1
VPS8YAL002W YMC1P32331 307 aa1.93□□□□□ -2.1
VPS8YAL002W SPR1P32603 445 aa1.93□□□□□ -2.1
VPS8YAL002W FRE1P32791 686 aa1.93□□□□□ -2.1
VPS8YAL002W OCT1P35999 772 aa1.93□□□□□ -2.1
VPS8YAL002W PTK1P36002 662 aaPredicted RBP1.93□□□□□ -2.1
VPS8YAL002W KDX1P36005 433 aa1.93□□□□□ -2.1
VPS8YAL002W BNA4P38169 460 aa1.93□□□□□ -2.1
VPS8YAL002W STE24P47154 453 aa1.93□□□□□ -2.1
VPS8YAL002W BUL1P48524 976 aa1.93□□□□□ -2.1
VPS8YAL002W YDL186WP48568 277 aa1.93□□□□□ -2.1
VPS8YAL002W BNA7Q04066 261 aa1.93□□□□□ -2.1
VPS8YAL002W TY4B-HP0C2J7 1802 aa1.93□□□□□ -2.1
VPS8YAL002W TY4B-JP47024 1803 aa1.93□□□□□ -2.1
VPS8YAL002W FIG2P25653 1609 aa1.93□□□□□ -2.1
VPS8YAL002W MAS1P10507 462 aa1.93□□□□□ -2.1
VPS8YAL002W SLM5P25345 492 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W RHB1P25378 209 aa1.93□□□□□ -2.1
VPS8YAL002W ICL1P28240 557 aaPredicted RBP1.93□□□□□ -2.1
VPS8YAL002W ECT1P33412 323 aa1.93□□□□□ -2.1
VPS8YAL002W YBR056WP38081 501 aa1.93□□□□□ -2.1
VPS8YAL002W IML3P38265 245 aa1.93□□□□□ -2.1
VPS8YAL002W TSC10P38342 320 aa1.93□□□□□ -2.1
VPS8YAL002W RRP4P38792 359 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W RTT107P38850 1070 aa1.93□□□□□ -2.1
VPS8YAL002W PAC11P40960 533 aa1.93□□□□□ -2.1
VPS8YAL002W TOS3P43637 560 aa1.93□□□□□ -2.1
VPS8YAL002W DRN1P53255 507 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W YNL146WP53906 100 aa1.93□□□□□ -2.1
VPS8YAL002W BET4Q00618 327 aa1.93□□□□□ -2.1
VPS8YAL002W YMR310CQ04867 317 aaPredicted RBP1.93□□□□□ -2.1
VPS8YAL002W MDM30Q05930 598 aa1.93□□□□□ -2.1
VPS8YAL002W SRO7Q12038 1033 aa1.93□□□□□ -2.1
VPS8YAL002W PAA1Q12447 191 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W NCB2Q92317 146 aa1.93□□□□□ -2.1
VPS8YAL002W TDH2P00358 332 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W TDH3P00359 332 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
VPS8YAL002W SEC63P14906 663 aa1.93□□□□□ -2.1
VPS8YAL002W KRS1P15180 591 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W CNA1P23287 553 aa1.93□□□□□ -2.1
VPS8YAL002W HXT2P23585 541 aa1.93□□□□□ -2.1
VPS8YAL002W HXT1P32465 570 aa1.93□□□□□ -2.1
VPS8YAL002W PAD1P33751 242 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
VPS8YAL002W SPT10P35208 640 aa1.93□□□□□ -2.1
VPS8YAL002W SBE22P38814 852 aa1.93□□□□□ -2.1
VPS8YAL002W GPI16P38875 610 aa1.93□□□□□ -2.1
VPS8YAL002W YMR134WP40207 237 aa1.93□□□□□ -2.1
VPS8YAL002W SCD6P45978 349 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1 RIP-Chip
VPS8YAL002W FMP33P46998 180 aa1.93□□□□□ -2.1
VPS8YAL002W KAP114P53067 1004 aa1.93□□□□□ -2.1
VPS8YAL002W SLT2Q00772 484 aa1.93□□□□□ -2.1
VPS8YAL002W GLO2Q05584 274 aa1.93□□□□□ -2.1
VPS8YAL002W RMD5Q12508 421 aa1.93□□□□□ -2.1
VPS8YAL002W RRP12Q12754 1228 aaKnown RBP1.93□□□□□ -2.1
VPS8YAL002W PSK1P31374 1356 aa1.93□□□□□ -2.1
VPS8YAL002W SEN1Q00416 2231 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W COX2P00410 251 aa1.92□□□□□ -2.1
VPS8YAL002W CHO1P08456 276 aa1.92□□□□□ -2.1
VPS8YAL002W POL30P15873 258 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W MGR1P25573 417 aa1.92□□□□□ -2.1
VPS8YAL002W RPS5P26783 225 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W YPS1P32329 569 aa1.92□□□□□ -2.1
VPS8YAL002W SPC97P38863 823 aa1.92□□□□□ -2.1
VPS8YAL002W ALP1P38971 573 aa1.92□□□□□ -2.1
VPS8YAL002W MBB1P39534 108 aa1.92□□□□□ -2.1
VPS8YAL002W GAT2P40209 560 aa1.92□□□□□ -2.1
VPS8YAL002W YPS6P40583 537 aa1.92□□□□□ -2.1
VPS8YAL002W PCP1P53259 346 aa1.92□□□□□ -2.1
VPS8YAL002W YPL014WQ02606 381 aa1.92□□□□□ -2.1
VPS8YAL002W RLI1Q03195 608 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W YMR178WQ03219 274 aaKnown RBP1.92□□□□□ -2.1
VPS8YAL002W GIM5Q04493 163 aa1.92□□□□□ -2.1
VPS8YAL002W FUS2Q05670 677 aa1.92□□□□□ -2.1
VPS8YAL002W CTS2Q06350 511 aa1.92□□□□□ -2.1
VPS8YAL002W GEP3Q08622 556 aa1.92□□□□□ -2.1
VPS8YAL002W BRR1Q99177 341 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W PRP16P15938 1071 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W MET16P18408 261 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W PBN1P25580 416 aa1.92□□□□□ -2.1
VPS8YAL002W NRP1P32770 719 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
VPS8YAL002W MRPL10P36520 322 aa1.92□□□□□ -2.1
VPS8YAL002W MAL32P38158 584 aa1.92□□□□□ -2.1
VPS8YAL002W SUR2P38992 349 aa1.92□□□□□ -2.1
VPS8YAL002W PRM9P39551 298 aa1.92□□□□□ -2.1
VPS8YAL002W ERV46P39727 415 aa1.92□□□□□ -2.1
VPS8YAL002W TFG2P41896 400 aaPredicted RBP1.92□□□□□ -2.1
VPS8YAL002W YGL117WP53133 265 aa1.92□□□□□ -2.1
VPS8YAL002W MAL12P53341 584 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 481.5 ms