RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 USP38Q8NB14 1042 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 WDR66Q8TBY9 1149 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 CCDC85AQ96PX6 553 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 NUP88Q99567 741 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 EPB41L4BQ9H329 900 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 PLK2Q9NYY3 685 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 SLAIN2Q9P270 581 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 KIF13AQ9H1H9 1805 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 ANKRD36CQ5JPF3 1778 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 PCDH11XQ9BZA7 1347 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 KCNJ18B7U540 433 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 CYTH3O43739 400 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 TCEA3O75764 348 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 EIF2S1P05198 315 aaKnown RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 ITGA2BP08514 1039 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 RASA1P20936 1047 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 COPB2P35606 906 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 NSUN2Q08J23 767 aaKnown RBP eCLIP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 AP1B1Q10567 949 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 KCNJ12Q14500 433 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 USP41Q3LFD5 358 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 CCDC153Q494R4 210 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 CEP128Q6ZU80 1094 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 SYT2Q8N9I0 419 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 PIP4K2CQ8TBX8 421 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 FERMT2Q96AC1 680 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 PAGE5Q96GU1 130 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 TCEANC2Q96MN5 208 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 HNRNPABQ99729 332 aaKnown RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 SH3GL1Q99961 368 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 ROPN1BQ9BZX4 212 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 CARD9Q9H257 536 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 OCEL1Q9H607 264 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 ROPN1Q9HAT0 212 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 NLRC4Q9NPP4 1024 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 FAIMQ9NVQ4 179 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 MAGEC2Q9UBF1 373 aaPredicted RBP6.14□□□□□ -1.43
POLR2B-213ENST00000639658 ZNF212Q9UDV6 495 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 SERTAD1Q9UHV2 236 aa6.14□□□□□ -1.43
POLR2B-213ENST00000639658 ARFGEF2Q9Y6D5 1785 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PHF20L1A8MW92 1017 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PLSCR1O15162 318 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 AFPP02771 609 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 CHGBP05060 677 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 ALOX15P16050 662 aaPredicted RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 EMP3P54852 163 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 GIT2Q14161 759 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 CLUL1Q15846 466 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 LIN52Q52LA3 116 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 MCM10Q7L590 875 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 AACSQ86V21 672 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 CROCCP3Q8IVE0 287 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 ANKLE1Q8NAG6 615 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 ZNF398Q8TD17 642 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 WASF1Q92558 559 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 KLHL29Q96CT2 875 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 CENPKQ9BS16 269 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 RTFDC1Q9BY42 306 aaPredicted RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 EPB41L5Q9HCM4 733 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 SEC31BQ9NQW1 1179 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 METTL5Q9NRN9 209 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 ABCF3Q9NUQ8 709 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PCDHA13Q9Y5I0 950 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 ACTL7BQ9Y614 415 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 NUP188Q5SRE5 1749 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 KIF1AQ12756 1690 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 AFDNP55196 1824 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 A0A0J9YVX5 310 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 EIF3FO00303 357 aaPredicted RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 LSM1O15116 133 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 FOXN1O15353 648 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 MSL3P1P0C860 447 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 RFC5P40937 340 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 RGS2P41220 211 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PTDSS1P48651 473 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 TOB1P50616 345 aaPredicted RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 ERVK-9P63128 1117 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 TUBA4AP68366 448 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 TMEM62Q0P6H9 643 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 EIF2B5Q13144 721 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PDCD4Q53EL6 469 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 C10orf76Q5T2E6 689 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 SYCP2LQ5T4T6 812 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 RNF220Q5VTB9 566 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 KRT40Q6A162 431 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 OLFML1Q6UWY5 402 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PI16Q6UXB8 463 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PNMA8AQ86V59 439 aaPredicted RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 NOSTRINQ8IVI9 506 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 KAZALD1Q96I82 304 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 COG3Q96JB2 828 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 PHAXQ9H814 394 aaKnown RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 SAR1AQ9NR31 198 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 NKX1-2Q9UD57 310 aaPredicted RBP6.13□□□□□ -1.43
POLR2B-213ENST00000639658 EID1Q9Y6B2 187 aa6.13□□□□□ -1.43
POLR2B-213ENST00000639658 HTR3EA5X5Y0 456 aa6.12□□□□□ -1.43
POLR2B-213ENST00000639658 GTPBP6O43824 516 aaPredicted RBP6.12□□□□□ -1.43
POLR2B-213ENST00000639658 PTPN2P17706 415 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms