RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 TOGARAM2Q6ZUX3 1019 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 DPP9Q86TI2 863 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 THAP9Q9H5L6 903 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 XPOTO43592 962 aaKnown RBP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 EIF3BP55884 814 aaKnown RBP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 TBCKQ8TEA7 893 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 GREM2Q9H772 168 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 TMPRSS15P98073 1019 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 FLOT2Q14254 428 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 ZMYM1Q5SVZ6 1142 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 GPATCH4Q5T3I0 446 aaKnown RBP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 SAMSN1Q9NSI8 373 aaKnown RBP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 GDF11O95390 407 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 SYCE1LA8MT33 242 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 CDO1Q16878 200 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 C7orf31Q8N865 590 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 ALKBH8Q96BT7 664 aaKnown RBP9.79□□□□□ -0.84
CSMD1-218ENST00000635120 ORAI2Q96SN7 254 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 CAPN11Q9UMQ6 739 aa9.79□□□□□ -0.84
CSMD1-218ENST00000635120 DCTN3O75935 186 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SPARCL1Q14515 664 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 C1orf146Q5VVC0 180 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 NUDCD3Q8IVD9 361 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 NACC1Q96RE7 527 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 PPP1R16BQ96T49 567 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SLC4A7Q9Y6M7 1214 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SOX5P35711 763 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SLC16A2P36021 539 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 NOP14P78316 857 aaKnown RBP9.78□□□□□ -0.84
CSMD1-218ENST00000635120 RNF14Q9UBS8 474 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 DBNLQ9UJU6 430 aaKnown RBP9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SDK1Q7Z5N4 2213 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 MMP1P03956 469 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SLFN14P0C7P3 912 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 OSTNP61366 133 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 GRAMD4Q6IC98 578 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 KIFC3Q9BVG8 833 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SAYSD1Q9NPB0 183 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 NOP53Q9NZM5 478 aaKnown RBP9.78□□□□□ -0.84
CSMD1-218ENST00000635120 HSPA4LO95757 839 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 MYL1P05976 194 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 HSPA2P54652 639 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 ZBTB18Q99592 522 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 ZBED6P86452 979 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 TLR7Q9NYK1 1049 aaKnown RBP9.78□□□□□ -0.84
CSMD1-218ENST00000635120 GYG2O15488 501 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 EMBQ6PCB8 327 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 FRA10AC1Q70Z53 315 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SYNGAP1Q96PV0 1343 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 ANXA13P27216 316 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 SEPT8Q92599 483 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 LRRC4Q9HBW1 653 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 GINM1Q9NU53 330 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 GOLGA8MH3BSY2 632 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 E2F6O75461 281 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 ZFP69BQ9UJL9 534 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 PLA2G4BP0C869 781 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 CDC25AP30304 524 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 KCTD2Q14681 263 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 TBC1D1Q86TI0 1168 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-218ENST00000635120 GIPC2Q8TF65 315 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 PAGE5Q96GU1 130 aa9.78□□□□□ -0.84
CSMD1-218ENST00000635120 PALMO75781 387 aa9.77□□□□□ -0.84
CSMD1-218ENST00000635120 GCFC2P16383 781 aaKnown RBP9.77□□□□□ -0.84
CSMD1-218ENST00000635120 DAB2P98082 770 aa9.77□□□□□ -0.84
CSMD1-218ENST00000635120 ARL13BQ3SXY8 428 aa9.77□□□□□ -0.84
CSMD1-218ENST00000635120 KIAA1841Q6NSI8 718 aa9.77□□□□□ -0.84
CSMD1-218ENST00000635120 CEP170P1Q96L14 293 aa9.77□□□□□ -0.84
CSMD1-218ENST00000635120 TAC1P20366 129 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 CAPRIN1Q14444 709 aaKnown RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 NUGGCQ68CJ6 796 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 CIAO1O76071 339 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 NSUN2Q08J23 767 aaKnown RBP eCLIP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 EPM2AIP1Q7L775 607 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 RNF139Q8WU17 664 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 DHX38Q92620 1227 aaKnown RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 FAF2Q96CS3 445 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 TRPV6Q9H1D0 765 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 SAMD9Q5K651 1589 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 LMNAP02545 664 aaKnown RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 ICE2Q659A1 982 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 PPP4R4Q6NUP7 873 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 XDHP47989 1333 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 MFAP3LO75121 409 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 MAP4K1Q92918 833 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 MLXIPLQ9NP71 852 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 SH2B2O14492 632 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 PCCAP05165 728 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 KITP10721 976 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 RAP1GDS1P52306 607 aa9.77□□□□□ -0.85
CSMD1-218ENST00000635120 KIF23Q02241 960 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-218ENST00000635120 SYT2Q8N9I0 419 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms