RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PKD2L1Q9P0L9 805 aa8.98□□□□□ -0.97
CLK1-215ENST00000621181 MRPL42Q9Y6G3 142 aaKnown RBP8.98□□□□□ -0.97
CLK1-215ENST00000621181 PIK3CDO00329 1044 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 MEIS2O14770 477 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 ATP9AO75110 1047 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 EYA4O95677 639 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 CYP21A2P08686 494 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 STAG3L1P0CL83 205 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 KIF5BP33176 963 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 CLCN6P51797 869 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 MRPS6P82932 125 aaKnown RBP8.97□□□□□ -0.97
CLK1-215ENST00000621181 NAALADL2Q58DX5 795 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
CLK1-215ENST00000621181 CMTR2Q8IYT2 770 aaKnown RBP8.97□□□□□ -0.97
CLK1-215ENST00000621181 KLHL23Q8NBE8 558 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 GPRASP2Q96D09 838 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 MSLNLQ96KJ4 702 aa8.97□□□□□ -0.97
CLK1-215ENST00000621181 TMEM221A6NGB7 291 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 M0R296 226 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 KCNA2P16389 499 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 ITGB5P18084 799 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 IBSPP21815 317 aaPredicted RBP8.96□□□□□ -0.97
CLK1-215ENST00000621181 DNAJB1P25685 340 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 NRIP1P48552 1158 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 TMEM62Q0P6H9 643 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 PKN1Q16512 942 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 MARCH8Q5T0T0 291 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 TRIM67Q6ZTA4 783 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 ADGRD2Q7Z7M1 963 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 NPAS4Q8IUM7 802 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 EFHBQ8N7U6 833 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 SPPL3Q8TCT6 385 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 POF1BQ8WVV4 589 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 RUFY2Q8WXA3 655 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 LINC01599Q8WXQ3 324 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 TNPO1Q92973 898 aaKnown RBP8.96□□□□□ -0.97
CLK1-215ENST00000621181 ZBTB10Q96DT7 871 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 PRRX2Q99811 253 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 MYL10Q9BUA6 226 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 SPZ1Q9BXG8 430 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 AZI2Q9H6S1 392 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 PSTPIP2Q9H939 334 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 LRFN2Q9ULH4 789 aa8.96□□□□□ -0.97
CLK1-215ENST00000621181 BARX2Q9UMQ3 279 aaPredicted RBP8.96□□□□□ -0.97
CLK1-215ENST00000621181 GSTTP1A0A1W2PQM5 241 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 RRN3P2A6NIE6 340 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 TTLL13PA6NNM8 815 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 E7EWF7 191 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.98
CLK1-215ENST00000621181 PPFIA3O75145 1194 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 SCG2P13521 617 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 INSRRP14616 1297 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 PTPN5P54829 565 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 COASYQ13057 564 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 PAK2Q13177 524 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 SPOUT1Q5T280 376 aaKnown RBP8.96□□□□□ -0.98
CLK1-215ENST00000621181 IER5LQ5T953 404 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 BMP8AQ7Z5Y6 402 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 JPH1Q9HDC5 661 aaPredicted RBP8.96□□□□□ -0.98
CLK1-215ENST00000621181 CLEC1BQ9P126 229 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 PADI3Q9ULW8 664 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 USP15Q9Y4E8 981 aaPredicted RBP8.96□□□□□ -0.98
CLK1-215ENST00000621181 SQORQ9Y6N5 450 aa8.96□□□□□ -0.98
CLK1-215ENST00000621181 IGSF9BQ9UPX0 1349 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 SPDYE3A6NKU9 549 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 ZXDAP98168 799 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 RTN4RL1Q86UN2 441 aaPredicted RBP8.95□□□□□ -0.98
CLK1-215ENST00000621181 ZNF654Q8IZM8 581 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 PRSS33Q8NF86 280 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 IGDCC4Q8TDY8 1250 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 RPGRIP1Q96KN7 1286 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 TLE6Q9H808 572 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 GINS2Q9Y248 185 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 PCDHB12Q9Y5F1 795 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 TRPV2Q9Y5S1 764 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 LOXHD1Q8IVV2 1947 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 CACNA1HO95180 2353 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 VPS13AQ96RL7 3174 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 KIAA1671Q9BY89 1806 aa8.95□□□□□ -0.98
CLK1-215ENST00000621181 LOC730098B7Z3J9 87 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 PER2O15055 1255 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 MAFGO15525 162 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
CLK1-215ENST00000621181 DDAH1O94760 285 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 GLP2RO95838 553 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 PSEN1P49768 467 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 GNAQP50148 359 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 PTH1RQ03431 593 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
CLK1-215ENST00000621181 TMEM266Q2M3C6 531 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 CASC1Q6TDU7 716 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 NFXL1Q6ZNB6 911 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 CRIPAKQ8N1N5 446 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 TBC1D32Q96NH3 1257 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 MAP3K14Q99558 947 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 LZTS2Q9BRK4 669 aa8.94□□□□□ -0.98
CLK1-215ENST00000621181 PHF7Q9BWX1 381 aaPredicted RBP8.94□□□□□ -0.98
CLK1-215ENST00000621181 CELF4Q9BZC1 486 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms