RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	WWC2	Q6AWC2	1192 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	EP400NL	Q6ZTU2	488 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	CMTR2	Q8IYT2	770 aa	Known RBP	24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	ESYT1	Q9BSJ8	1104 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	FAM49A	Q9H0Q0	323 aa	Predicted RBP	24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	ALG13	Q9NP73	1137 aa	Known RBP	24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	PADI3	Q9ULW8	664 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	TRPV2	Q9Y5S1	764 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	CNTNAP5	Q8WYK1	1306 aa		24.05	■■□□□ 1.44
NECAB3-222	ENST00000607805	IRS1	P35568	1242 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	ACTR2	P61160	394 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	ITGB3BP	Q13352	177 aa	Predicted RBP	24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	ADAM15	Q13444	863 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	NAALADL2	Q58DX5	795 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	HEATR3	Q7Z4Q2	680 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	NPAS4	Q8IUM7	802 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	TRAPPC12	Q8WVT3	735 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	RIC8A	Q9NPQ8	531 aa		24.04	■■□□□ 1.44
NECAB3-222	ENST00000607805	IGKV6D-21	A0A0A0MT36	114 aa		24.03	■■□□□ 1.44
NECAB3-222	ENST00000607805	ITGB1	P05556	798 aa		24.03	■■□□□ 1.44
NECAB3-222	ENST00000607805	AR	P10275	920 aa		24.03	■■□□□ 1.44
NECAB3-222	ENST00000607805	SPPL3	Q8TCT6	385 aa		24.03	■■□□□ 1.44
NECAB3-222	ENST00000607805	CELF4	Q9BZC1	486 aa	Known RBP	24.03	■■□□□ 1.44
NECAB3-222	ENST00000607805	AZI2	Q9H6S1	392 aa		24.03	■■□□□ 1.44
NECAB3-222	ENST00000607805	CACNA1H	O95180	2353 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	SMIM35	A0A1B0GVV1	85 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	LINC01565	O15544	149 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	STAT5B	P51692	787 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	TMEM62	Q0P6H9	643 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	CEP55	Q53EZ4	464 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	APOA5	Q6Q788	366 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	MICU3	Q86XE3	530 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	MSLNL	Q96KJ4	702 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	TMX1	Q9H3N1	280 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	TRPC6	Q9Y210	931 aa		24.02	■■□□□ 1.44
NECAB3-222	ENST00000607805	MEIS1	O00470	390 aa		24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	SMAD4	Q13485	552 aa	Known RBP	24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	CLUL1	Q15846	466 aa		24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	PPP1R18	Q6NYC8	613 aa		24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	MTHFD1L	Q6UB35	978 aa		24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	NME8	Q8N427	588 aa		24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	TNPO1	Q92973	898 aa	Known RBP	24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	AGO4	Q9HCK5	861 aa	Known RBP	24.01	■■□□□ 1.43
NECAB3-222	ENST00000607805	MYO10	Q9HD67	2058 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	EYA4	O95677	639 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	FOS	P01100	380 aa	Predicted RBP	24	■■□□□ 1.43
NECAB3-222	ENST00000607805	SCG2	P13521	617 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	CLK2	P49760	499 aa	Known RBP	24	■■□□□ 1.43
NECAB3-222	ENST00000607805	KLHL23	Q8NBE8	558 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	PGBD1	Q96JS3	809 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	SDF4	Q9BRK5	362 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	ANO3	Q9BYT9	981 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	USP34	Q70CQ2	3546 aa		24	■■□□□ 1.43
NECAB3-222	ENST00000607805	CCNE2	O96020	404 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	STAG3L1	P0CL83	205 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	SREBF1	P36956	1147 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	SLC26A2	P50443	739 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	EXOSC10	Q01780	885 aa	Known RBP	23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	PAK2	Q13177	524 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	ABHD15	Q6UXT9	468 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	FAM43B	Q6ZT52	329 aa	Predicted RBP	23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	ADGRD2	Q7Z7M1	963 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	UPF3B	Q9BZI7	483 aa	Known RBP	23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	IGFLR1	Q9H665	355 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	RBM28	Q9NW13	759 aa	Known RBP	23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	CLEC1B	Q9P126	229 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805	CD207	Q9UJ71	328 aa		23.99	■■□□□ 1.43
NECAB3-222	ENST00000607805		M0QZ92	97 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	STXBP3	O00186	592 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	GATM	P50440	423 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	NAPA	P54920	295 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	KRT76	Q01546	638 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	CSPP1	Q1MSJ5	1256 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	HERC4	Q5GLZ8	1057 aa	Predicted RBP	23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	NIPA1	Q7RTP0	329 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	EFHB	Q8N7U6	833 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	CRYGN	Q8WXF5	182 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	POP1	Q99575	1024 aa	Known RBP	23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	BRPF3	Q9ULD4	1205 aa		23.98	■■□□□ 1.43
NECAB3-222	ENST00000607805	ZBTB42	B2RXF5	422 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	hCG_1984214	I3L0E3	225 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	DHX15	O43143	795 aa	Known RBP	23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	MGEA5	O60502	916 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	PAN2	Q504Q3	1202 aa	Known RBP	23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	KIAA0319L	Q8IZA0	1049 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	ZNF713	Q8N859	430 aa	Predicted RBP	23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	KCNH6	Q9H252	994 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	CDHR5	Q9HBB8	845 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	ERVK-5	Q9HDB9	667 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	FAM217B	Q9NTX9	383 aa	Predicted RBP	23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	BARHL2	Q9NY43	387 aa		23.97	■■□□□ 1.43
NECAB3-222	ENST00000607805	HBP1	O60381	514 aa		23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	KLRC1	P26715	233 aa		23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	SARS	P49591	514 aa	Known RBP	23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	ADCY7	P51828	1080 aa		23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	IRX6	P78412	446 aa	Predicted RBP	23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	COASY	Q13057	564 aa		23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	AP3B2	Q13367	1082 aa		23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	TMEM266	Q2M3C6	531 aa		23.96	■■□□□ 1.43
NECAB3-222	ENST00000607805	HFE2	Q6ZVN8	426 aa		23.96	■■□□□ 1.43

Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms