RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
XRCC1-209ENST00000599693 PSTPIP2Q9H939 334 aa17.15■□□□□ 0.34
XRCC1-209ENST00000599693 ZDBF2Q9HCK1 2354 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 GATMP50440 423 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 TMEM62Q0P6H9 643 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 RBM23Q86U06 439 aaKnown RBP17.14■□□□□ 0.33
XRCC1-209ENST00000599693 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-209ENST00000599693 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
XRCC1-209ENST00000599693 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-209ENST00000599693 LY9Q9HBG7 655 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 JPH1Q9HDC5 661 aaPredicted RBP17.14■□□□□ 0.33
XRCC1-209ENST00000599693 JADE2Q9NQC1 790 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 LRFN2Q9ULH4 789 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 TRPC6Q9Y210 931 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 PCDHGC5Q9Y5F6 944 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
XRCC1-209ENST00000599693 CFAP54Q96N23 3096 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 MAFGO15525 162 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
XRCC1-209ENST00000599693 GNAQP50148 359 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 UBE3AQ05086 875 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 UBE2SQ16763 222 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 FBXL6Q8N531 539 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 CELF4Q9BZC1 486 aaKnown RBP17.13■□□□□ 0.33
XRCC1-209ENST00000599693 AZI2Q9H6S1 392 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 TLE6Q9H808 572 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
XRCC1-209ENST00000599693 KDM3AQ9Y4C1 1321 aa17.13■□□□□ 0.33
XRCC1-209ENST00000599693 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
XRCC1-209ENST00000599693 SIGLEC14Q08ET2 396 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 TCF15Q12870 199 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 PLCB4Q15147 1175 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 SRBD1Q8N5C6 995 aaKnown RBP17.12■□□□□ 0.33
XRCC1-209ENST00000599693 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 SLC9A2Q9UBY0 812 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 PCDHB12Q9Y5F1 795 aa17.12■□□□□ 0.33
XRCC1-209ENST00000599693 SMIM35A0A1B0GVV1 85 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 ST18O60284 1047 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
XRCC1-209ENST00000599693 KRT76Q01546 638 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 NME8Q8N427 588 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 SUSD6Q92537 303 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 RPGRIP1Q96KN7 1286 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 SNX27Q96L92 541 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 TLR9Q9NR96 1032 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 AAASQ9NRG9 546 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
XRCC1-209ENST00000599693 PER2O15055 1255 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 CHMLP26374 656 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 ACTR2P61160 394 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
XRCC1-209ENST00000599693 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 FAM43BQ6ZT52 329 aaPredicted RBP17.1■□□□□ 0.33
XRCC1-209ENST00000599693 PLPPR4Q7Z2D5 763 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 MICAL1Q8TDZ2 1067 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 CDCA3Q99618 268 aaPredicted RBP17.1■□□□□ 0.33
XRCC1-209ENST00000599693 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 KCNH7Q9NS40 1196 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
XRCC1-209ENST00000599693 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 NFASCO94856 1347 aa17.1■□□□□ 0.33
XRCC1-209ENST00000599693 MGEA5O60502 916 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 FGF18O76093 207 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
XRCC1-209ENST00000599693 STAT5BP51692 787 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
XRCC1-209ENST00000599693 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
XRCC1-209ENST00000599693 DUSP6Q16828 381 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
XRCC1-209ENST00000599693 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
XRCC1-209ENST00000599693 ASIC4Q96FT7 647 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 NEK1Q96PY6 1258 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
XRCC1-209ENST00000599693 CACNA1HO95180 2353 aa17.08■□□□□ 0.33
XRCC1-209ENST00000599693 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
XRCC1-209ENST00000599693 FSCN2O14926 492 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 SGSM2O43147 1006 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 PRC1O43663 620 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 PDE4AP27815 886 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
XRCC1-209ENST00000599693 ERVFC1P60507 584 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 PTPN21Q16825 1174 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 NFXL1Q6ZNB6 911 aa17.08■□□□□ 0.32
XRCC1-209ENST00000599693 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms